Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01486 ATGCCTCCTTCTTCTTCTTCTTTTTATTCTGTTTCTGATTTGGCTATTCCCCATTTTACCCTCAAGACAACCTTCATTATCTCCTACCTGGCGGTGGCGCTAGTGGCGGTGGCGCCCCTCCCCTCACGCTCCATCAACATTACCGCCGTCCTCTCCCCTCTGCTCCACACCTCTCTCCCTCCGCCCTCCCGGATGTCCTCCGCTACCACGTCCTCCTCCAATTCCTCTCCCTCTCCGACCTCCACTCCCTCCCTCCCTCCGGCAAGCTCTTCACCACTCTCTTCCAGACCACTGGCCGCGCCCCCTCCAACTCCGGCTCCCTTAACCTCACCCGCGACCCTCGAAACGGCATCGTTACGATCACTTCCCCTTACTCCCCTTCCTCAAACGCCACCGTTTTGTCCTTAGTCAAAACCTTACCTTATAACGTCACCGTTTTCTCCGTTGATAACCTCATCCTCCCTTTCGGCCTCGATCTCATGGCCTCGGAGACTCACCCCAATCTAGGGCTCAACATCACCAAGGCCTTAATCGACGGCAAGAACTTCAACGTCGCCGCCTCCATGCTCGCAGCCTCGGGCGTCGTCGAAGAATTCGAGGCCGACGAGGGCGGCGCTGGAATTACTATGTTCGTCCCCGTCGACGATGCATACGCCGATCTGCCTCCAGCCGTTAGCTTGCAATCCCTTCCGGCGGATAAGAAAGCCGTCGTGCTCAAATTTCATGTGCTGCATTCGTATTACCCCTTGGGATCGTTGGAATCGGTGGTGAACCCTCTTCAGCCGACGCTCGCGACGGAGGCCATGGGTGCTGGGAGCTTCACGCTCAACATTTCCCGCGTGAACGGCTCCGTTGCGATCAACACTGGGATCGTGCAAGCTTCCGTGACGCAGACGGTGTTTGATCAGAACCCCGTGGCAATCTTCGGCGTCTCGAAGGTTCTGCTGCCGAGGGAGATCTTCGGGAAGAATCCGATCACGACGCCGAAGCTTGGATCGACTGCACCGCCTCCGGAAGACGATGCGCTGTCACCAGAGGGGTCGCCGGGGGCAATGGATGGCCAGCCTTCGCACCTCTCATCGCCGCCCGGGTTCCGCGAGGACATGCAGTCCAACGCTGCTGCCTCCGGTGTTCGTGGTTCCAAATTCAAGTCTTCCATTGTTGTTGCTGTATTTGTTTGCTGTATAGGGTTTTGTATTTAG 1202 0.5732 MPPSSSSFYSVSDLAIPHFTLKTTFIISYLAVALVAVAPLPSRSINITAVLSPFPDFSQFTSLLAPISSDLAGRTSLSLLAVPNSRLSSAPHLSPSALPDVLRYHVLLQFLSLSDLHSLPPSGKLFTTLFQTTGRAPSNSGSLNLTRDPRNGIVTITSPYSPSSNATVLSLVKTLPYNVTVFSVDNLILPFGLDLMASETHPNLGLNITKALIDGKNFNVAASMLAASGVVEEFEADEGGAGITMFVPVDDAYADLPPAVSLQSLPADKKAVVLKFHVLHSYYPLGSLESVVNPLQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGKNPITTPKLGSTAPPPEDDALSPEGSPGAMDGQPSHLSSPPGFREDMQSNAAASGVRGSKFKSSIVVAVFVCCIGFCI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01486 435 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 25 416 IPR033254 -
Arst4g01486 435 MobiDBLite consensus disorder prediction 361 407 - -
Arst4g01486 435 Gene3D FAS1 domain 206 353 IPR036378 -
Arst4g01486 435 SUPERFAMILY FAS1 domain 212 352 IPR036378 -
Arst4g01486 435 ProSiteProfiles FAS1/BIgH3 domain profile. 44 188 IPR000782 -
Arst4g01486 435 SMART fasc_3 244 353 IPR000782 -
Arst4g01486 435 FunFam fasciclin-like arabinogalactan protein 4 44 190 - -
Arst4g01486 435 FunFam Fasciclin-like arabinogalactan protein 4 206 353 - -
Arst4g01486 435 SUPERFAMILY FAS1 domain 43 190 IPR036378 -
Arst4g01486 435 Gene3D FAS1 domain 38 190 IPR036378 -
Arst4g01486 435 ProSiteProfiles FAS1/BIgH3 domain profile. 205 350 IPR000782 -
Arst4g01486 435 Pfam Fasciclin domain 217 352 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01486 Arst-Chr4 19723537 19725842 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01486 - - aip:107639086 724.546