Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01447 ATGGCAATGGAGGAGGAAGAGCCGAGCCAGCTGAAGAGAGCGTTGATTGATTCCTCTGCTGGAGCTATTTCTGGTGCTATATCAAGAACAGTTACCTCTCCCCTTGATGTTATTAAGATTAGGTTCCAGGTTCAACTCGAGCCCACATCTTCATGGGCTTTACTACGCAAGGAAATTTCTGCACCATCAAAATATACTGGCATGCTTCAAGCAAGCAAAGATATCTTTAGAGAAGAAGGCATACGGGGTTTTTGGCGGGGCAATGTACCAGCTTTGCTCATGGTTATGCCATATACATCCATACAGTTCACAGTTTTGCACAAGTTAAAATCTTTTGCCTCTGGTTCTTCCAAATCAGAGAATCACATTAATTTGAGCCCTTATCTATCCTATGTGAGTGGGGCATTAGCTGGGTGTACAGCTACTGTAGGATCATATCCTTTTGATCTCCTTCGAACCATATTAGCTTCTCAAGGTGAACCGAAGGTTTATCCAAACATGAGGTCAGCATTCGTTGACATTGTTAAGACTCGTGGTTTCTCTGGCTTGTATGCCGGACTGTCACCAACGCTAGTTGAGATTATACCTTATGCAGGCCTACAATTTGGTACTTACGATACGTTTAAACGTTGGGCTATGGCATGGAACCACACTCAATACTCAAATGCTATTGGAGAAGATAGCCTATCTAGCTTTCAACTTTTCCTGTGTGGGTTGGCTGCTGGTACATGCGCTAAGCTTGTTTGTCATCCACTTGATGTAGTCAAGAAAAGATTTCAGATTGAAGGTCTGCAAAGGCATCCAAGATATGGAGCTCGTGTGGAACACCGTGCGTACAGAAACATGTTTGACGCCATGAAACGGATATCACAGGCAGAAGGTTGGGCTGGTCTGTATAAGGGGATCATCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACATTTGTAGCATATGAATTGACATCAGATTGGCTCGAGTCAATTTTGACTTGA 999 0.4374 MAMEEEEPSQLKRALIDSSAGAISGAISRTVTSPLDVIKIRFQVQLEPTSSWALLRKEISAPSKYTGMLQASKDIFREEGIRGFWRGNVPALLMVMPYTSIQFTVLHKLKSFASGSSKSENHINLSPYLSYVSGALAGCTATVGSYPFDLLRTILASQGEPKVYPNMRSAFVDIVKTRGFSGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHTQYSNAIGEDSLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDAMKRISQAEGWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESILT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01447 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 112 IPR018108 -
Arst4g01447 332 PANTHER SOLUTE CARRIER FAMILY 25 18 327 - -
Arst4g01447 332 SUPERFAMILY Mitochondrial carrier 13 321 IPR023395 -
Arst4g01447 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 211 IPR018108 -
Arst4g01447 332 Gene3D Mitochondrial carrier domain 9 329 IPR023395 -
Arst4g01447 332 Pfam Mitochondrial carrier protein 18 113 IPR018108 -
Arst4g01447 332 Pfam Mitochondrial carrier protein 229 327 IPR018108 -
Arst4g01447 332 Pfam Mitochondrial carrier protein 126 212 IPR018108 -
Arst4g01447 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 229 326 IPR018108 -
Arst4g01447 332 PRINTS Mitochondrial carrier protein signature 17 30 IPR002067 GO:0055085
Arst4g01447 332 PRINTS Mitochondrial carrier protein signature 87 107 IPR002067 GO:0055085
Arst4g01447 332 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Arst4g01447 332 PRINTS Mitochondrial carrier protein signature 30 44 IPR002067 GO:0055085
Arst4g01447 332 PRINTS Mitochondrial carrier protein signature 238 260 IPR002067 GO:0055085
Arst4g01447 332 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Arst4g01447 332 FunFam Mitochondrial thiamine pyrophosphate carrier 1 8 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01447 Arst-Chr4 18372778 18377142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01447 4 332 Organic Solute Cotransporters AT3G21390 75.375 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01447 K15108 - gmx:100803750 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01447 4 18372778 18377142 Arst4g01447 4 18372778 18377142 ECH
Arst1g03437 1 95444491 95447637 Arst4g01447 4 18372778 18377142 PCT