Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01398 ATGCATGATTGTGTGAAAGTCAACGGAAAGCAAGTTTATTGGCATATTGCAAATCATCAAGTACCTTTCTATGTGGGTCTAGCAATCCTCTACTTTGCATACAGAAGAAAAGCACCAATTTACTTGATAGACTTTACCTGCTACCGTCCACCTAGTTCTCATAGGCTACCTATTGCCATGTTTGAAGAGAATAGTGTCTTAGATGATTTAGATCCAGAGTCTGTTGCTTTCCAGTGCAAGATCATAGCGAAATCTGGATTCAGCGAGGAAACAGCCATTACTTCATCTTTAGCACAGATACCAAAAGTAAAATCTCTTGCCTTAGCCCTTGATGAGGCCGAAACCATAATGTGTTCAGCAATCTCAGACCTGTTTTGGAGAAACAACATCAACCCAAAATCCATCGACATACTAATCACCAACAGTTGTGTGTTCTGTCCTACACCATCTCTTAGTGCCATGGTGGTTAACAAGTTCAAGATGAGGAGCAACATCATGAGCTTCAACCTATCAGGTATGGGGTGTAGCGCCGGAATCATATCGGTGAGTCTGGCTAAGGACTTGTTGAGGGTTCATAGGGGCTCATTAGCTCTAATTGTGAGCTCAGAGACCCTTAATCTGAATTGGTACACAGGTAAAGTACACTCCATGTTGCTGACTAATTGTCTCTTCAGAATGGGTGGTGCTGCTATATTGATGTCTAGCAAGGTTAATGATAAACATAAAGCAAAGTATGAACTACAACATATTGTTAGAACGATCAATGCTCAAGATGATCAAGCTCATAGATGTGTCTACCAGGATGTGGATCCAGAAAACAAAGAAGGTATTTCGATATCAAAGGATGTTGTCCATGTGGCCGGAGATACATTGAAGAAGAACATAGCTTCACTAGGGCCATTAGTTTTGCCATTGAGAGAGCAATTCCTATATGTAATTTCTATTATATGCTGCAAGGTGTTGTATAGAAGAAGATCAAGCATCTATACTCCAAATTTCAATCTCGCCTTCGAGCATTTCTGCATACATTCCGGGGGAAGATCTGTCATAAATGCCATCGAGAGAAGCTTGAGGTTAAGGAAACAGGACGTGGAAGCATCCAACATGACCCTTTACAGATTTGGAAACACGTCGTCTTCTTCGATTTGGTATGAGCTTAGCTACACAGAAGCGAAAGGGAGGATGAAACGTGGCGATAGGGTGTGGCAAATCGCCATTGGAAGCGGATTCAAGTGTAGCAGCGCTGTGTGGAAATGTTTACAGGACGTGACCCCGGACAATGGCAGTGCTTGGAGGGATACAATTAACATGTACCCTGTACAAGTAACTGATATGAAAATAAGTTGA 1347 0.4195 MHDCVKVNGKQVYWHIANHQVPFYVGLAILYFAYRRKAPIYLIDFTCYRPPSSHRLPIAMFEENSVLDDLDPESVAFQCKIIAKSGFSEETAITSSLAQIPKVKSLALALDEAETIMCSAISDLFWRNNINPKSIDILITNSCVFCPTPSLSAMVVNKFKMRSNIMSFNLSGMGCSAGIISVSLAKDLLRVHRGSLALIVSSETLNLNWYTGKVHSMLLTNCLFRMGGAAILMSSKVNDKHKAKYELQHIVRTINAQDDQAHRCVYQDVDPENKEGISISKDVVHVAGDTLKKNIASLGPLVLPLREQFLYVISIICCKVLYRRRSSIYTPNFNLAFEHFCIHSGGRSVINAIERSLRLRKQDVEASNMTLYRFGNTSSSSIWYELSYTEAKGRMKRGDRVWQIAIGSGFKCSSAVWKCLQDVTPDNGSAWRDTINMYPVQVTDMKIS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01398 448 Gene3D - 61 418 IPR016039 GO:0016746
Arst4g01398 448 PANTHER 3-KETOACYL-COA SYNTHASE 26 441 IPR012392 GO:0006633|GO:0016020|GO:0016747
Arst4g01398 448 SUPERFAMILY Thiolase-like 248 419 IPR016039 GO:0016746
Arst4g01398 448 SUPERFAMILY Thiolase-like 29 236 IPR016039 GO:0016746
Arst4g01398 448 CDD CHS_like 25 417 - -
Arst4g01398 448 PIRSF Very_long_ch_3-ktacl-CoA_syn 5 448 IPR012392 GO:0006633|GO:0016020|GO:0016747
Arst4g01398 448 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 338 418 IPR013747 -
Arst4g01398 448 Pfam FAE1/Type III polyketide synthase-like protein 34 319 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01398 Arst-Chr4 16889874 16898441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01398 10 443 Miscellaneous Gene Families AT1G19440 51.818 1.49e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01398 K15397 - gmx:100783404 686.797