Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01377 ATGACAAAAGATGCCTCGGAACCGGGTGGAAGTGGGGGTGGTGGCTTCCACGCGGTTCATGCGGAGCGTGACCTAGAGTCAAATTGGGAAGTTGACCTCGCCAAGAAACTCGAGGAGTATCTGCTGAAAATTTGCTCCGGGGAGATCACCGGCGAAGAGGAAGGACACATTCCAGTGAATTTTGCAGAAGCTGCTCTACTGCTTCAGGGATCGATACAGGTGTATAGTAGAAAGGTGGAATATCTATACACTCTGGTGTTGCGTGCTTTAGAGTTCCTTTCACAGAAAAGACAGCAAGATCATATAGATGGAGGATCAGACCAACATGATGAGAGTGGTCCCTCTGCTATTACCAATGAAGAAAATGATCAATTCTGGTGCTCGGATGACATCCCAGTTGAAGAGAGGAATTCCTTGGATGACTCTGCAAGCAAAGAAGTGAATTTGGACCACTTCATAAAACCCCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATACTGCTGGTGATGGTGGGGAATTGGAGTCATATCTGTTGTCCACCACAGACTTGTACCAGGATTTTATTCTGTTGGATACATCAGATGCTGTTGCAGTGGATGAGTTTCTAAAGGATAGCAAAGCCAATGCAGCCCAAAATGTTGCTAATAGAGGAGCTTCAACTCGTAAAAGCTTTCTTTCTCCTACAAGGAATTCTGAAGGAGGTGCTAACAAATCTTCAGTGGCAAAAAGTCAGCATGCTAATTCCAACTGTTCCCCTAAAGTTGATTGCCATGACGATGATAATGTTCGGCCCAGTTCTCCCGTCTCTGGTGGTATTGATAATTGTGATTTTGGTTATAACATGGATGATGGATGCAATGCATTTAGGGATTCAGACAATTCAGATGTTGATGATGATGATCCATGGAAACCTTTGAATCCACATGAACCAGGCAACTTGAAAGTGAAGCCGTTTAGAAAAGTTAAAGGATTAAAGAAGAATGGAATTAATGTGAGACGGCGAGTATCAATGAGCATTTTGTTTCCACCTGCAAAATTGCATGGTCCTATTAGTCCAGAGCTCATGGCAATGTGGGAGATGCAGCATCATGCCCACGAACGACAAAAGGATTCTACATCTCTTCCACTATATGAGAAGCTTAGGCAGTCTCTTATCAATGAGGGGAGTAAAACCGATGGAGAATTTTTCAATGCAGAAGCTGATAATGATGACCATGAATTTGATACTGGAAATCCTGATTTTGATATGCCAGAGAATACATACATGGATGAAGATCTACCTCATAACAAAGAGAATGAAGTTAATGATGCTCATGCTGAGGGTGATGAAGATGTAGATAATGATGTTCCAAATTCTCAGGAAAGTTTAGAAGATCTCTGTCGCTCTCACCTGAATGCCCTTCTAGCTAGCATAGCTGAAACTGAGAAGCAAACAGAATTGGCCACTAGGGTTTCAACATGGAAACAAAGAATTGAGCACAGCTTGGAAGAAGAGGATTCCCGGCCACCATTTGATATTCATGAATATGGGGCGAGAATTTTGGACAAACTATCCCTTGAAGAAAGTAGTAGCTGTGTCCTATCCTTTTCTGATTTGGTTGAGGGACAAACAAAGTTCGATATTGCCCGAAGCTTTTCTTCTCTCCTTCAACTGGTGAACAATAGAGACGTGGACCTTCAAAGAAATGTCGACAATGGGAAACCTGTGTGCTACACGGCTGTTAACCCATTCCATGTTAGGCTCCTTAAGCATGACAAAGAACGGGAAGGCATGCAGTTTCGCTTGTCAAAAAAGAGACCAAAGTCTGCAACTAAAAAACCAGCTAAGAACAAAGATGGAAGGGGAAAGTCTCCCACCAATGGTTCATCAAGGGAATACGGACCAATGGGGATGTCACCACCGGCGAATTGCAAGATTTCATCGAAGCTCAGAAAGGTTAGTGCTATAAAGTTATCTCCTGAATCCAAGAGGAGGCGTAGATCTCAGTACGTCGAACCAGTTAACTTGCATTCGGGACGGTGA 2031 0.4333 MTKDASEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHIDGGSDQHDESGPSAITNEENDQFWCSDDIPVEERNSLDDSASKEVNLDHFIKPPANLVVLEGDCLDTAGDGGELESYLLSTTDLYQDFILLDTSDAVAVDEFLKDSKANAAQNVANRGASTRKSFLSPTRNSEGGANKSSVAKSQHANSNCSPKVDCHDDDNVRPSSPVSGGIDNCDFGYNMDDGCNAFRDSDNSDVDDDDPWKPLNPHEPGNLKVKPFRKVKGLKKNGINVRRRVSMSILFPPAKLHGPISPELMAMWEMQHHAHERQKDSTSLPLYEKLRQSLINEGSKTDGEFFNAEADNDDHEFDTGNPDFDMPENTYMDEDLPHNKENEVNDAHAEGDEDVDNDVPNSQESLEDLCRSHLNALLASIAETEKQTELATRVSTWKQRIEHSLEEEDSRPPFDIHEYGARILDKLSLEESSSCVLSFSDLVEGQTKFDIARSFSSLLQLVNNRDVDLQRNVDNGKPVCYTAVNPFHVRLLKHDKEREGMQFRLSKKRPKSATKKPAKNKDGRGKSPTNGSSREYGPMGMSPPANCKISSKLRKVSAIKLSPESKRRRRSQYVEPVNLHSGR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01377 676 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 303 IPR031719 -
Arst4g01377 676 MobiDBLite consensus disorder prediction 652 667 - -
Arst4g01377 676 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 304 595 IPR031737 -
Arst4g01377 676 Gene3D Structural maintenance of chromosome 1. Chain E 508 570 IPR023093 -
Arst4g01377 676 MobiDBLite consensus disorder prediction 100 121 - -
Arst4g01377 676 MobiDBLite consensus disorder prediction 591 676 - -
Arst4g01377 676 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Arst4g01377 676 MobiDBLite consensus disorder prediction 216 272 - -
Arst4g01377 676 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 15 670 IPR031739 GO:0030261
Arst4g01377 676 MobiDBLite consensus disorder prediction 216 254 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01377 K11490 - gmx:100786571 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01377 4 16372307 16377200 Arst4g01377 4 16372307 16377200 ECH