Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01354 ATGAAAATGTGCTTTGAAATAAGGAAGCAGAAATATCTCGAAGCCTTGGACAGTAAGGAGAAGACAAGGGCTCTTGAAATACTGGGGAAGGATTTGAAAGTGTTCCAAACATACAATGAAGAATTATACAGAGAAATCACATATCTGTTAACCCTTGAAAACTTTAGGGATAATGAACAGTTATCAAAATATGGGGATACCAAAACAGCTAGGAAAACAATGATAGTAGAGCTTAAGAAACTGATTGAAGCAAATCCCCGTTTGAATGACAAGCTTGTATTTCCTTCATTGAAGCCATCAAGGTTACGAACACTTATTAATCAGAGTCTGAATTGGCAGCATCAGCTCTGCAAGAACCCAAAGCCAAATCCGGACATAAGGACTCTGTTCGTTGACCACACATGCTCTCCTCCCGGTCCGGCCGGTGCAAGCTCAAGCACGCCAAGGTCACCATCAGTCCCGGCAGCTGTTAATCCTTCTGCGGTTGCGGCTGCGACTGGGGCCGGGACGTCTGTTCCCCTGAACCAAACCTTAGTGTCTGCATTGAAGCATTCCAGGACACCACCTACTCCTATGAATAACGAGCAGCGAGGAAAACGGTTGCGATCTGTTCCACAAGCAACCGAGGCGACGAATTCTCTGGTGGTCCGTCAACAAGTCCCTCGGTCTCTTGACGACCTTACTAGAACGCTGTTTTGTACATTGAATCAAGGATCAACAGTTACAAGCATGGATTTTCATCCTTCTCTTCATTCCTCACTTCTTATCGGAACTGCAAGTGGTGAAATTTCATTCTGGGAAGTAGGACGCAATGAGAGGCCAATCTTAAAGCCTTTTGCCATTTGGAACAGTGCTACTTGCTCGGTCTTATTTCAGGCTGCGTATGCCAAAGACTCGAATGTATCCGTTTGCCGTGTATCATGGAGCGCTGACGGCAGATATCTTGGGGTTGCTTTCACAAAGCATTTGGTTCATCTGTATACTTATCAAGCACCTAATGACTTAAAAGAGCATTTGGAGGTTGATGCTCATGTTGGCAGTGTCAATGATTTGGCGTTTTCTTCCCCACACAAACAGCTATGCATGGTAACTTGCGGGGATGATAAGCTCATAAAGGTGTGGGACTTAACCGGACACAACCTGTTTAACTTCCAAGGTCACGAAGCAGCGGTTTATTCTATTTGTATGAATGTGAAGGAAAACGTTGAGTACATATTGTCAAGTAGTGTTGATGGAAAAATAAAGGCGTGGTTGTTTGATAACTCGGACACAAAAGTGGAATATGATGCCCATGGAAAATACTGCACCACAATGCTCTATAGCGCCGATGGAACTAAATTGTTTTGTTGCGGGACAAGTAAAAACAATGGAGATTCTTTCCTAGTTGAGTGGAATGAAAATGATGGAGTTATAAAGAGAACCTATGCTGGATTAGGAAAGAAATCGATGGGCATGATGCAATTCGACACGACCAAGAATCGCTTCTTGGTTGCCGGCGAAGACAAGCTGATAAAGTTCTGGGAGCTGGACAACCCTAATATTCTAGCTAGTGTACAAGTTGATGGCAATTTATCTAGTGTTCCCCGGGTGAGGTTTAATAGGATAGGGAGTCTGCTTGCTGTAACCACCGCAGATGGCAGGGTAAAGATTTTTGCTAACGCCGACGGCATCAAGCACTTAAGGGCCATTCAAGCTTGGTCTTGCCGGGCTTCGTCCAAAGCGAATACCAATCCAGCCATGACTCATTTGGAACTCGGAGAGGGTAGCTCTGCTCGTAGATCTAAATCTTTTACGGAATTACCAGAAATACTTAAGTGTCAAATGATTACTCTGCCCGATACCATGTATCCCACAGCCAAGGTTGCTCGACTTGTCTACATGAATAACGGAGTTGGCCTTCTCGGTGTTGGTTCCGATGGGACTCAGAAGCTGTGGCGATGGAATCGAACTGAATTGAATCCTACTGGAAAGGCGATGGCAAGTGCTTGTCCAGTGCTTTGGCGACCAAATTCCGGTTTTGTCATGACAAACGATGTTCCAGAAAATTCAGAAGGCACAATTCCTTGTGCAATCATCTCAAAGAACGATTCTTATGTTTTGTCAGCATGCGGAGGAAAACTTACACTTTTCAACATGCTCTCATTTAAGGTAATGGTGAGTTTCATGTCGCCACCACCTCGTTCAACTTGCCTTGCATTTCACCCTCAAGATAATAACGTTGTTGCAATTGGAAAGGAAGATTCCTCCATCCATATTTACAACATTCAGTCGGAAGAGGTCAAAGCTAAATTGACTGGTGATGAGAAGTGCATCACTAGTTTAGCTTTTTCAATGCTGCTGGCTGTCTTAGTTTCATCAGATGCCGATGCTCAGATCTTCTTTTGGAGCATTGACACATGGAATTTGAAGAAATCATTGAAAATGTATTTGCGCGACGAAAGTCCAGTAAATGGCGATACTCAAGTGCAATTTCACTGTAATCAGATAAACTTGCTGGTATGCCACCGCGAGGTGCTAAGTCTATATGATGCATCAAGAATGGAACTGGTTATGCAGTGGGTTCCAAAGGCTCATATGTCTGGTTCCATATCATGTGCTACATACTCGGGCAATGGCAAATTGATCTATACTGCTCTTACCGATGGCAACATTGTAATATTTAATGCTGACACCTTGATGCTGCGATGTCGTATCGCTCCATCTGTTTACCTCATGACCCCAAACTTACCAAATAGCGAAAATGTGTATGCGGCTGTACTTGCAGCAAATCCACAGGAGCCGAATCAATTTGCAGTTGGACTGTCCAATGGAGCTATTAAGGTCATTGAGCCCCAAGCTTCTCGTCGAGGAAATAATGGTAGCTGGATGGGAAAATTTAAACGCGCGGGAAAACCGCCGCGCCACGGTGGCCGAGCATGCAGCAGTGCCATGGAGGAGACAGTGTCTGATGATGGAAACAGTGGTGCAAATACAATATAA 2979 0.4434 MKMCFEIRKQKYLEALDSKEKTRALEILGKDLKVFQTYNEELYREITYLLTLENFRDNEQLSKYGDTKTARKTMIVELKKLIEANPRLNDKLVFPSLKPSRLRTLINQSLNWQHQLCKNPKPNPDIRTLFVDHTCSPPGPAGASSSTPRSPSVPAAVNPSAVAAATGAGTSVPLNQTLVSALKHSRTPPTPMNNEQRGKRLRSVPQATEATNSLVVRQQVPRSLDDLTRTLFCTLNQGSTVTSMDFHPSLHSSLLIGTASGEISFWEVGRNERPILKPFAIWNSATCSVLFQAAYAKDSNVSVCRVSWSADGRYLGVAFTKHLVHLYTYQAPNDLKEHLEVDAHVGSVNDLAFSSPHKQLCMVTCGDDKLIKVWDLTGHNLFNFQGHEAAVYSICMNVKENVEYILSSSVDGKIKAWLFDNSDTKVEYDAHGKYCTTMLYSADGTKLFCCGTSKNNGDSFLVEWNENDGVIKRTYAGLGKKSMGMMQFDTTKNRFLVAGEDKLIKFWELDNPNILASVQVDGNLSSVPRVRFNRIGSLLAVTTADGRVKIFANADGIKHLRAIQAWSCRASSKANTNPAMTHLELGEGSSARRSKSFTELPEILKCQMITLPDTMYPTAKVARLVYMNNGVGLLGVGSDGTQKLWRWNRTELNPTGKAMASACPVLWRPNSGFVMTNDVPENSEGTIPCAIISKNDSYVLSACGGKLTLFNMLSFKVMVSFMSPPPRSTCLAFHPQDNNVVAIGKEDSSIHIYNIQSEEVKAKLTGDEKCITSLAFSMLLAVLVSSDADAQIFFWSIDTWNLKKSLKMYLRDESPVNGDTQVQFHCNQINLLVCHREVLSLYDASRMELVMQWVPKAHMSGSISCATYSGNGKLIYTALTDGNIVIFNADTLMLRCRIAPSVYLMTPNLPNSENVYAAVLAANPQEPNQFAVGLSNGAIKVIEPQASRRGNNGSWMGKFKRAGKPPRHGGRACSSAMEETVSDDGNSGANTI 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01354 992 Gene3D - 617 948 IPR015943 GO:0005515
Arst4g01354 992 MobiDBLite consensus disorder prediction 949 992 - -
Arst4g01354 992 Gene3D - 156 467 IPR015943 GO:0005515
Arst4g01354 992 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 783 945 IPR011044 -
Arst4g01354 992 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 949 IPR027728 GO:0006355
Arst4g01354 992 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 949 IPR027728 GO:0006355
Arst4g01354 992 ProSitePatterns Trp-Asp (WD) repeats signature. 362 376 IPR019775 -
Arst4g01354 992 SUPERFAMILY Putative isomerase YbhE 228 421 - -
Arst4g01354 992 ProSiteProfiles Trp-Asp (WD) repeats profile. 341 376 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 511 552 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 468 508 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 714 754 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 377 418 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 846 888 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 757 796 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 421 465 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 228 267 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 284 328 IPR001680 GO:0005515
Arst4g01354 992 SMART WD40_4 334 375 IPR001680 GO:0005515
Arst4g01354 992 MobiDBLite consensus disorder prediction 184 203 - -
Arst4g01354 992 Gene3D - 479 610 IPR015943 GO:0005515
Arst4g01354 992 ProSiteProfiles Trp-Asp (WD) repeats profile. 384 417 IPR001680 GO:0005515
Arst4g01354 992 ProSiteProfiles Trp-Asp (WD) repeats profile. 764 805 IPR001680 GO:0005515
Arst4g01354 992 Pfam WD domain, G-beta repeat 341 375 IPR001680 GO:0005515
Arst4g01354 992 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 362 801 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01354 Arst-Chr4 15259920 15270396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01354 340 551 Miscellaneous Gene Families AT5G08390 24.186 7.77e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01354 - - ahf:112741705 1893.63