Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01345 ATGGGTGTCACAGCAACATTCACACATGAGTTTTGTTCCTCTGTTGCTCCGCCACGCCTTTTCAAGGGCTTGATCACAGACTCAAGTAATTTGCTTCCAAAGCTATTACCACAGTTGATTAAAGATGTCACCATTATCCAAGGAGATGGAGAAGCTGGAACCATTGAACAAGTTAACTTTGCACAAGCTATCCCCTTCAAATATCTAAAACACAGGATTGATGTGGTTGATAAGGAAAACCTGGTGTGCAAATACACTATGATTGAAGGGGATCCATTGGGAGAAAAGCTTGAGTCTATAGCTTATGAGGTGAATTTTGAGGCCAATAGTGATGGAGGTTGCATATGTAAAATGACTAGCAAATACAATGCCATAGGTGATGCTGAAATTAAGGAGGAAGAAGTAAAGGAAGGAAGAGAAAGCTCCATTGGAATTTGTAGGGTTGTGGAAGCCTACCTATTGAAGAATCCACAAATTTATGCTTAA 486 0.4012 MGVTATFTHEFCSSVAPPRLFKGLITDSSNLLPKLLPQLIKDVTIIQGDGEAGTIEQVNFAQAIPFKYLKHRIDVVDKENLVCKYTMIEGDPLGEKLESIAYEVNFEANSDGGCICKMTSKYNAIGDAEIKEEEVKEGRESSIGICRVVEAYLLKNPQIYA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01345 161 FunFam Major pollen allergen Bet v 1-A 1 160 - -
Arst4g01345 161 SUPERFAMILY Bet v1-like 5 160 - -
Arst4g01345 161 PRINTS Major pollen allergen Bet V1 signature 51 60 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01345 161 PRINTS Major pollen allergen Bet V1 signature 86 99 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01345 161 PRINTS Major pollen allergen Bet V1 signature 67 86 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01345 161 PRINTS Major pollen allergen Bet V1 signature 4 24 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01345 161 PRINTS Major pollen allergen Bet V1 signature 27 37 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01345 161 PRINTS Major pollen allergen Bet V1 signature 111 127 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01345 161 PRINTS Major pollen allergen Bet V1 signature 145 155 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01345 161 Pfam Pathogenesis-related protein Bet v 1 family 4 156 IPR000916 GO:0006952
Arst4g01345 161 Gene3D - 1 161 IPR023393 -
Arst4g01345 161 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 90 122 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01345 161 CDD Bet_v1-like 6 153 - -
Arst4g01345 161 PANTHER - 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01345 Arst-Chr4 14857667 14859088 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01345 - - adu:107483518 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01345 4 14857667 14859088 Arst4g01345 4 14857667 14859088 ECH