Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01341 ATGGGTGTTCACACTTTTGAAGAGGAGTCAACCTCACCGGTGCCTCCAGCAAAACTATTCAAAGCCACCGTGGTAGACGGCGATGAACTCACCCCAAAGCTGATTCCGGCAATCCAGAGTATTGAGATCGTTGAAGGAAACGGAGGCCCTGGAACTGTCAAGAAGGTTACCGCTGTTGAAGATGGGAAAACTAGTTATGTGCTACACAAGATTGATGCAATTGATGAGGCTACCTACACATATGACTACACAATATCCGGAGGAACAGGGTTCCAAGAGATCTTAGAGAAAGTTTCATTCAAGACAAAGCTTGAGGCTGCTGATGGTGGATCCAAAATCAAGGTCTCTGTTACATTCCACACCAAGGGTGATGCTCCTCTCCCTGATGAAGTTCATCAAGATGTCAAACAAAAGAGCCAAGGAATCTTCAAGGCTATTGAGGGTTATGTTTTGTCCAACTAG 462 0.4545 MGVHTFEEESTSPVPPAKLFKATVVDGDELTPKLIPAIQSIEIVEGNGGPGTVKKVTAVEDGKTSYVLHKIDAIDEATYTYDYTISGGTGFQEILEKVSFKTKLEAADGGSKIKVSVTFHTKGDAPLPDEVHQDVKQKSQGIFKAIEGYVLSN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01341 153 Pfam Pathogenesis-related protein Bet v 1 family 1 153 IPR000916 GO:0006952
Arst4g01341 153 Gene3D - 2 153 IPR023393 -
Arst4g01341 153 SUPERFAMILY Bet v1-like 2 153 - -
Arst4g01341 153 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 88 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01341 153 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01341 153 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01341 153 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01341 153 PRINTS Major pollen allergen Bet V1 signature 108 124 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01341 153 PRINTS Major pollen allergen Bet V1 signature 142 152 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01341 153 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01341 153 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01341 153 PANTHER - 1 153 - -
Arst4g01341 153 CDD Bet_v1-like 5 150 - -
Arst4g01341 153 FunFam Major pollen allergen Bet v 1-A 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01341 Arst-Chr4 14766751 14768737 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01341 - - gmx:100305867 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01341 4 14766751 14768737 Arst4g01341 4 14766751 14768737 ECH
Arst4g01341 4 14766751 14768737 Arst1g03375 1 94836456 94837160 PCT