Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01290 ATGGCACCCTGGCCTAGGTTACTTATTCTCTTAACATTTTTCTCTAACACTTTCTCTTACACATTCACCATAATCAACAACTGCCCTCATACTATATGGCCTGGTACACTTGCTGGTTCAGGGAGCCCTAAACTATCAACGACTGGATTCCAGTTGGACTCAGGCCAAAGTGTCAGACTAACCACGGTACCAGGATGGTCGGGACGAATATGGGCAAGGACGGGTTGCAAATTTGATGTCACAGGAGCTGGCAAATGCCTAACTGGTGACTGTGGGGGAAAACTGGAATGTGATGGAAATGGTGCAACACCTCCTACCTCACTGTTTGAGATAACACTCGACGGAGCCAATGGACAAGATTTTTACGATGTCAGCATGGTAGATGGCTACAATTTGCCGTTAGTGGCTCTACCACGAGGTGTATCTGGTGAAGCCTGTAATGCTACAGGATGCGTGACTGATATCAACAGAGGTTGCCCTAGAGAACTTCAAGTGCTTGGTGAAGAAGGAAACCAGCGTGGTGTAGTAGGGTGCAGAAGTGCTTGTGAGGCATTCAAGTCGGATCGGTACTGCTGCGCTGGACAATATGCTAACCCAAAGAGTTGCCAGCCTACATTTTATTCAACTATCTTCAAGAAGGCGTGTCCTAGAGCTTATAGTTATGCATTTGATGATGGAACCAGCACTTTCACTTGCAAAGCTAGTGAATATGAGATTGTTTTTTGTCCCTACAGGATGAAAAACCAAAATCATACACCACCACCTAGAAAGCCCAAGCTGTTTCTAAGACACGAACATTATTGA 804 0.4552 MAPWPRLLILLTFFSNTFSYTFTIINNCPHTIWPGTLAGSGSPKLSTTGFQLDSGQSVRLTTVPGWSGRIWARTGCKFDVTGAGKCLTGDCGGKLECDGNGATPPTSLFEITLDGANGQDFYDVSMVDGYNLPLVALPRGVSGEACNATGCVTDINRGCPRELQVLGEEGNQRGVVGCRSACEAFKSDRYCCAGQYANPKSCQPTFYSTIFKKACPRAYSYAFDDGTSTFTCKASEYEIVFCPYRMKNQNHTPPPRKPKLFLRHEHY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01290 267 PANTHER OS03G0233200 PROTEIN 10 243 IPR001938 -
Arst4g01290 267 Gene3D Thaumatin 20 243 IPR037176 -
Arst4g01290 267 PIRSF PR5 2 261 IPR001938 -
Arst4g01290 267 PRINTS Pathogenesis-related protein signature 120 136 IPR001938 -
Arst4g01290 267 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Arst4g01290 267 PRINTS Pathogenesis-related protein signature 21 33 IPR001938 -
Arst4g01290 267 PRINTS Pathogenesis-related protein signature 69 80 IPR001938 -
Arst4g01290 267 PRINTS Pathogenesis-related protein signature 82 111 IPR001938 -
Arst4g01290 267 SUPERFAMILY Osmotin, thaumatin-like protein 21 243 IPR037176 -
Arst4g01290 267 SMART tha2 22 243 IPR001938 -
Arst4g01290 267 FunFam THAUMATIN-LIKE PROTEIN 1 20 243 - -
Arst4g01290 267 CDD TLP-PA 21 242 - -
Arst4g01290 267 ProSitePatterns Thaumatin family signature. 82 97 IPR017949 -
Arst4g01290 267 Pfam Thaumatin family 26 243 IPR001938 -
Arst4g01290 267 ProSiteProfiles Thaumatin family profile. 19 243 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01290 Arst-Chr4 13655327 13656584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01290 7 243 Receptor kinase-like Gene Family AT5G38280 49.167 3.36e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01290 - - gmx:106798928 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01290 4 13655327 13656584 Arst4g01290 4 13655327 13656584 ECH
Arst7g01791 7 25097829 25100164 Arst4g01290 4 13655327 13656584 PCT