Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01276 ATGACAATGTCTTCGTTCTCATGCGCTACTACTGTTTTTCTACTGCTTCTACTCACAATTGACCTTCGCATGGCAGGTGCACCATTACTAACCAACGTTTATCCTTACTTTAACTATAAAGATAACCCACGTGACATATTACTATCCTATGCTATTTTCACATCACCAAATGTTGTGGTACAAGATGGTCAATATGGGTACCAGAATCTTTTTGATGCTATGCTAGATGCAGTGCATGCTGCCATTGATAACACTGGAATTGGTTTTGTTGAGGTTGTTGTTTCTGAGAGCGGGTGGCCCTCAAGTGGAGATTTTGGTGCAACTTATGATAGTGCCCAGATTTATTTGGATAATTTGATTCGTCATGTTAATAGGGGTACTCCAAGAAGATCTTGA 396 0.399 MTMSSFSCATTVFLLLLLTIDLRMAGAPLLTNVYPYFNYKDNPRDILLSYAIFTSPNVVVQDGQYGYQNLFDAMLDAVHAAIDNTGIGFVEVVVSESGWPSSGDFGATYDSAQIYLDNLIRHVNRGTPRRS 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01276 131 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 130 IPR044965 GO:0004553|GO:0005975
Arst4g01276 131 SUPERFAMILY (Trans)glycosidases 25 130 IPR017853 -
Arst4g01276 131 ProSitePatterns Glycosyl hydrolases family 17 signature. 90 103 IPR000490 GO:0004553|GO:0005975
Arst4g01276 131 Pfam Glycosyl hydrolases family 17 4 130 IPR000490 GO:0004553|GO:0005975
Arst4g01276 131 Gene3D Glycosidases 9 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01276 Arst-Chr4 13409745 13412863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01276 29 130 Glycoside Hydrolase AT4G16260 61.538 1.97e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01276 - - adu:107483443 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01276 4 13409745 13412863 Arst4g01276 4 13409745 13412863 ECH