Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01274 ATGATAATGTCTTCGTTCTCATGGGTTACTGCTCTATTGCTTCTTCTATACATAGCTAAGCTTCGCTTGGCAGATGCTCAAATTGGTGTGTGCTATGGGATGCTGGGCAACAATTTACCAGCAACAAAGGAAGTGATAGATGTTTACAGATCAAATAACATCAAACAAATGAGACTCTATGATCCCAATCAAGCTGCTCTACAAGCACTTAGAAACTCCGGCATTGAACTCATTCTTGGAGTTCCAAACTCTGACCTTCAAGGGCTTGCCACAAACTCTGACAGTGCACGCCAATGGGTGCAAAGAAATGTGCTAAGCTTTTGGCCTAGTGTCAAAATCAAGTACATTGCAGTTGGCAATGAAGTGAGACCTGTTGGAGACTCCACTTCATGGATGGCTCAGTATGTTCTCCCAGCAATTCAGAATGTATACCAAGCTATTAGAGCTTAAGGCCTCCATGATCAAATCAAGGTTTCAACTGCCATTGACATGTCCCTCTTAGGAAACTCTTTTCCTCCTTCACAAGCCTCATTTAGGGCTGACGTCAGGTCATACCTAGACCCAATTATAGGGTATTTGGTATATGCAGGTGCACCATTACTAACCAACGTTTATCCTTACTTTAGCTATAAAGATAACCCACGTGACATATCACTACCTTATGCTATTTTCACATCACCAAATGTTGTGGTACAAGATGGTCAATATGGGTACCAAAATCTTTTTGATGCTATGCTAGATGCAGTGCATGCTGCCATTGATAACACTGGAATTGGTTTTGTTGAGGTTGTTGTTTCTGAGAGCGGGTGGCCCTCAAGTGGAGATTTTGGTGCAACTTATGATAGTGCCCAGATTTATTTGGATAATTTGATTCGTCATGTTAATGGGGGCACTCCTAGAAGGCCTTGGAAGCCTACAGAAACTTATTTGTTTGCCATGTTTGATGAGAACCAGAAGAATCCAGAGCTGGAGAAACATTTTGGACTTTTTTTTCCTAATAAACAGAAGAAGTATTCATTTGGGTTTGGTGCAGAAAGGAGAAGGGAATTCTTTGCCAATGAGTTCAATGCAACAGTTGTTCCATTATTGAAGAGTGACATTTGA 1104 0.4121 MIMSSFSWVTALLLLLYIAKLRLADAQIGVCYGMLGNNLPATKEVIDVYRSNNIKQMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNSDSARQWVQRNVLSFWPSVKIKYIAVGNEVRPVGDSTSWMAQYVLPAIQNVYQAIRAXGLHDQIKVSTAIDMSLLGNSFPPSQASFRADVRSYLDPIIGYLVYAGAPLLTNVYPYFSYKDNPRDISLPYAIFTSPNVVVQDGQYGYQNLFDAMLDAVHAAIDNTGIGFVEVVVSESGWPSSGDFGATYDSAQIYLDNLIRHVNGGTPRRPWKPTETYLFAMFDENQKNPELEKHFGLFFPNKQKKYSFGFGAERRREFFANEFNATVVPLLKSDI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01274 367 Pfam Glycosyl hydrolases family 17 28 341 IPR000490 GO:0004553|GO:0005975
Arst4g01274 367 Gene3D Glycosidases 27 343 - -
Arst4g01274 367 FunFam glucan endo-1,3-beta-glucosidase, basic 28 342 - -
Arst4g01274 367 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Arst4g01274 367 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 342 IPR044965 GO:0004553|GO:0005975
Arst4g01274 367 SUPERFAMILY (Trans)glycosidases 28 341 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01274 Arst-Chr4 13316745 13319020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01274 34 346 Glycoside Hydrolase AT4G16260 61.270 2.81e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01274 - - ccaj:109791097 575.859