Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01266 ATGGCGGAGAAGTACAACATGAAGAACCCCGCCGTCAAGCGCATTCTCCAAGAGGTCAAGGAGATGCAGTCCAATCCTTCCGATGATTTCACGAGTCTCCCTCTCGAGGAAAATATATTTGAATGGCAATTTGCAATTAGAGGACCTCGTGATACTGAATTTGAGGGTGCTGTCTATCATGGACGGATCCAATTGCCTTCAGAGTATCCATTCAAACCACCTTCATTTATGTTATTGACGCCTAATGGACGTTTCGAGACCCAAACAAAGATTTGCTTGAGCATATCAAATCATCACCCTGAGCATTGGCAACCATCATGGAGTGTAAGGACCGCTTTAGTTGCACTGATTGCATTCATGCCTACCAACCCTAATGGTGCTTTGGGGTCGTTGGACTACAAGAAGGAAGAAAGGCGTACCTTGGCCATCAAATCTCGTGAAGCGCCTCCGAAATTTGGGACTCCTGAACGTCAAAAACTGATTGATGAGATACACGAGTATATGCTAAGCAAGGCACCCCCTGTTCCTCAACATAGCTCCATACAACTACTCGAAGAAGAGCATTCCAGAGACGAGGAGGCCGAGTCCCAGGCAAATTCCCATAATGCTGAGGCTTTACCTGCTGAAGAGGGGATTCCAGATCAAGCAGGAGATAGAATTGTTGAAGAGGAGGTAGTTGTTGATGATAATCTTCAAGGAGTTGAAGCTTCAACGGAGATCCAATCCAATGTTTCAAGGAACCAGTCGCCCCATAATTCTGGTTTAAGGGTTCAAAATCCGAAGCCGGAGACTAGGATACAGCAAAAGCTTGATGATCATATTTTCACATTGATAGCCATTGGACTTGCCATTGCAATTGTGGCCCTTTTGCTGAAGAAGTTCGTTAACTTTTCATGCCCTTTTTACGTGATAATTCAATCTAACGCCACCTTCCCTCGCTATTATCATCACCAGGCTCACGCGCCCGAGACAAGTCAGCAACCACACCACCCATTTGGCGCTCACATTTTCCATGATGACACCCCTGGAGCTGAAGCAACCCACCACTACCAGCTGGGTGTTGATGCTCCGGCACAATCGCCGTCGAGCCATGGCGGCGGTGGCCTTGACTCATCATCATTCTACTCTTCTTTCTCGGATCTCCTTAAAGGAACCTTACGCGGCCACACGTTAACAATGCCCGACGATATCACACACTTGTCAACCAAACACCACAACGAACTCAGACAAATATGCGGCCACACCGATTACCCTGACGTGTGCTTCTCCACCATCGCACCGCATCTCCACGGCGAGCACTTCGACCTCACCCACGTCCTCCAAGCTTCCATAACGGCCTGCTCGATCGAGTTGAAGCTGACCATAGAGAAGTCGAAGAGGCACTCGAGCACTTCGTCGCCGGAGAACCTAGGTGCAGTCATGTACGTGGACTGTAGGGTGCAGTATACCAACGCGCTTGAGAACCTCCAAAAAGCGAGTGATGCTGCTGCGGGGCGTGATCTTGGAACGGTTACCATCATGCTTAGTTCTGTTATGGCTGACGTGGCAACATGTGAGAGCGGTTTTCAGGATCTTGAGTCCTCTACCTTCGTTTCCGGGTCGGTTGGAATTATGGCAAGCAATTGTCTTGCCATTGCTCATATGGTTCCCCATCAGTAG 1659 0.4876 MAEKYNMKNPAVKRILQEVKEMQSNPSDDFTSLPLEENIFEWQFAIRGPRDTEFEGAVYHGRIQLPSEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRTLAIKSREAPPKFGTPERQKLIDEIHEYMLSKAPPVPQHSSIQLLEEEHSRDEEAESQANSHNAEALPAEEGIPDQAGDRIVEEEVVVDDNLQGVEASTEIQSNVSRNQSPHNSGLRVQNPKPETRIQQKLDDHIFTLIAIGLAIAIVALLLKKFVNFSCPFYVIIQSNATFPRYYHHQAHAPETSQQPHHPFGAHIFHDDTPGAEATHHYQLGVDAPAQSPSSHGGGGLDSSSFYSSFSDLLKGTLRGHTLTMPDDITHLSTKHHNELRQICGHTDYPDVCFSTIAPHLHGEHFDLTHVLQASITACSIELKLTIEKSKRHSSTSSPENLGAVMYVDCRVQYTNALENLQKASDAAAGRDLGTVTIMLSSVMADVATCESGFQDLESSTFVSGSVGIMASNCLAIAHMVPHQ 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01266 552 MobiDBLite consensus disorder prediction 319 338 - -
Arst4g01266 552 SUPERFAMILY UBC-like 11 133 IPR016135 -
Arst4g01266 552 CDD UBCc 12 151 IPR000608 -
Arst4g01266 552 NCBIfam pectinesterase inhibitor domain 398 548 IPR006501 GO:0004857
Arst4g01266 552 SMART ubc_7 13 173 - -
Arst4g01266 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 406 549 IPR035513 -
Arst4g01266 552 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Arst4g01266 552 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Arst4g01266 552 SMART PMEI_2 403 545 IPR006501 GO:0004857
Arst4g01266 552 MobiDBLite consensus disorder prediction 239 259 - -
Arst4g01266 552 Gene3D Ubiquitin Conjugating Enzyme 1 173 IPR016135 -
Arst4g01266 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 406 550 IPR035513 -
Arst4g01266 552 MobiDBLite consensus disorder prediction 184 198 - -
Arst4g01266 552 FunFam ubiquitin-conjugating enzyme E2 32 1 174 - -
Arst4g01266 552 CDD PMEI-like_2 406 549 - -
Arst4g01266 552 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 130 - -
Arst4g01266 552 Pfam Plant invertase/pectin methylesterase inhibitor 408 545 IPR006501 GO:0004857
Arst4g01266 552 MobiDBLite consensus disorder prediction 184 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01266 Arst-Chr4 13155664 13159847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01266 3 296 Miscellaneous Gene Families AT3G17000 61.538 8.25e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01266 K10578 - adu:107483435 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01266 4 13155664 13159847 Arst4g01266 4 13155664 13159847 ECH