Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01202 ATGTTCTTCAGCGGTGATCCTTCGACGCGTAAGCGCATTGATTTAGGTGGTCGCAGCTCGAAGGAAAGGGACCGGAAGAATCTTCTGGAGCAGACAAGGTTGGAGCGAAATCGCCGCATGTGGTTGCGCCAGCAGAATTCTGCTGCGATTAAGATTCAGAAATTCTACAGAGGGAGAAAAGTTGTCCGGAATGAACAGTCTAAGCTGCGAGAAAAATGCCATAAAATCTACGGGAAGTACTGCCAGAATTTAGACAGGAGTGCTTTTGGTCCAGATTCTGATTTCCTCCGGCAGTTCCTCTTTTTCTTCAATGCAGAAAATAATGATGATGTTTTAGCTCTTGTGAATATTTGTCGACTGCTTCAACAGTTTGTTCAACAGAGTGGGGACGTTGTGGGGCTTTTTTCTGGTCTAGATTACTCATCCACTTGTCCTCTGGTCAACTACCGGGTGAAGCAGTTGGTATATACTTGTATTCGAGCCTTACATCAGAATAGAAATCAGTTGAAGGATCAATTTTTATTGGCTCCTGAGGAATCTAGTGTAACAGCTATTCCTTTATTGGAAGTTTTAGTGTTATTGATAGATATCAAACTTCCATGGAGCTGTAAGATAGTAGGACATATGTTTCAAAACAATGCATTTGGTCTACTTAGAGAGATTATTCTCACAGCAAAGGATGATGTAGATAATCGTATTTACCCCGCAAAGGGATCATCATTGGAATGTGTGCTTGCTGTTGTAATGTGTCATATTGGTCAGAAGCCATGTATTTGTTCATATTTTGATCCAAGATATGGCTTCTCTTCGCAAATCCTTACAATTCCGTTCCTGTGGGATGCTTTTCCAGACTTAAGACAGGTTTATGCAACACAAGGCCTGAATCAACATTGTGTTCATCAGATGGCAACTCTTGTTCCAGATCTAATCAATTTTCTACCTAAGGACATATCTGATGAAATTCCTACCTATGCTTGTCTGCTTGGAAATATATTAGAAACCGCGGGAATTGCTTTATCACAACCTGACTGTTCGTTTGATATGGCCATGGACCTTGCAGCTATTGCTACATTTTTGCTTGAGTCACACCCATCGCTGAAACTGTTGAATAAGAAAGAAAATTCCATGACTCGTGAGGATGACACTGGTGATGATGAAGTCATGGAAGTAGCTTTGGACAGGAAATTGGAGCAACAAATTTGCAATGCCATAGATACTCGCTTCCTTCTACAATTGACAAATATATTATTTAGAGATATTTCATCTGTCAATGGTTCAGATTATGGGCCAGATGATCGGGAGGTTGCAGCTGTTGGTGCTATTTGTGGATTTTTATATGTTATCTTCAACACATTGCCACTTGAAAGGATTATGACTGTGCTTGCTTACAGAACCGAACTTGTTCCTATGTTATGGAAATTTATGAAGCAGTGTCATGAGAATAAACAATGGTTATCTTTGTCTGAGCGGTTATCTTACCTTTCTGGTGACGCACCTGGTTGGCTGTTACCTCTGGCTGTATTCTGTCCTGTCTACAAGCACATGCTCATGATAGTTGATAATGAGGAGTTCTATGAGCAGGGGAAACCACTATCACTGGAGGACATTAGAAGCCTAATCATTCTGTTAAAACAGGTTCTGTGGCAGTTGTTGTGGGTGAATCATACATCATCTGCTACTCCAGTAAAATCTGTTCCAGTTACCACGGTTAGTAAAAGGCAATCTATTGAAGCCATTCAACAGAGGGTTAGCATTGTGGTCTCTGAGCTGCTTTCCCAGCTGCAAGATTGGAACAATCGTCGACAGTTTACTTCCCCCACTGACTTCCATGCTGATGGGGTGAATGACTCCTTCATCTCTCAGGCTTTGATGGAAAAGACACGAGCAAATGAAGTTTTAAAACAGGCTGCTTTTTTGATACCATTTACAAGCAGGGTTAAAATATTCACTTCTCAACTAGCTGATGTTCGGCAACAACATGGATCTCAGGCCTTATTTACTAGAAACAGATTCAGAATAAGACGAGATCATATATTGGAGGATGCTTATAATCAAATGAGCCAGTTGTCAGAAGATGATCTTCAGGGATTGATTCGTGTGAGTTTTGTAAACGAATTTGGAGTTGAAGAGGCTGGAATAGATGGAGGTGGAATATTCAAAGATTTCATGGAGAACATCACACGTGCTGCCTTTGATGTGCAGTATGGATTATTTAAGGAGACAGCAGATCACCAGCTTTATCCCAATCCTGGATCAGGGATGATACATGAGCAACATCTTCAATTTTTCCACTTTCTTGGTACACTCCTTGCAAAGGCAATGTTTGAAGGGATTCTGGTTGATTTACCATTTGCTAATTTCTTTTTGAGCAAATTGAAACAAAAGCACAACTATTTGAATGACTTGCCATCTTTGGACCCAGAATTGTATCGTCATCTTATATTTCTAAAGGGGCGGAGCCACTCATACATTGCCCCCCCTAACCTTCAACTTTTTCTCATAAGTTATGTGTAA 2514 0.4069 MFFSGDPSTRKRIDLGGRSSKERDRKNLLEQTRLERNRRMWLRQQNSAAIKIQKFYRGRKVVRNEQSKLREKCHKIYGKYCQNLDRSAFGPDSDFLRQFLFFFNAENNDDVLALVNICRLLQQFVQQSGDVVGLFSGLDYSSTCPLVNYRVKQLVYTCIRALHQNRNQLKDQFLLAPEESSVTAIPLLEVLVLLIDIKLPWSCKIVGHMFQNNAFGLLREIILTAKDDVDNRIYPAKGSSLECVLAVVMCHIGQKPCICSYFDPRYGFSSQILTIPFLWDAFPDLRQVYATQGLNQHCVHQMATLVPDLINFLPKDISDEIPTYACLLGNILETAGIALSQPDCSFDMAMDLAAIATFLLESHPSLKLLNKKENSMTREDDTGDDEVMEVALDRKLEQQICNAIDTRFLLQLTNILFRDISSVNGSDYGPDDREVAAVGAICGFLYVIFNTLPLERIMTVLAYRTELVPMLWKFMKQCHENKQWLSLSERLSYLSGDAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQGKPLSLEDIRSLIILLKQVLWQLLWVNHTSSATPVKSVPVTTVSKRQSIEAIQQRVSIVVSELLSQLQDWNNRRQFTSPTDFHADGVNDSFISQALMEKTRANEVLKQAAFLIPFTSRVKIFTSQLADVRQQHGSQALFTRNRFRIRRDHILEDAYNQMSQLSEDDLQGLIRVSFVNEFGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETADHQLYPNPGSGMIHEQHLQFFHFLGTLLAKAMFEGILVDLPFANFFLSKLKQKHNYLNDLPSLDPELYRHLIFLKGRSHSYIAPPNLQLFLISYV 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01202 837 ProSiteProfiles HECT domain profile. 690 816 IPR000569 GO:0004842
Arst4g01202 837 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 9 817 IPR044611 GO:0000209|GO:0061630
Arst4g01202 837 Pfam HECT-domain (ubiquitin-transferase) 726 817 IPR000569 GO:0004842
Arst4g01202 837 MobiDBLite consensus disorder prediction 1 22 - -
Arst4g01202 837 ProSiteProfiles IQ motif profile. 45 72 IPR000048 GO:0005515
Arst4g01202 837 SUPERFAMILY Hect, E3 ligase catalytic domain 659 824 IPR035983 GO:0004842
Arst4g01202 837 Gene3D Hect, E3 ligase catalytic domains 624 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01202 Arst-Chr4 11283785 11297515 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01202 K10589 - gmx:100787467 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01202 4 11283785 11297515 Arst4g01202 4 11283785 11297515 ECH
Arst1g03271 1 93755992 93765859 Arst4g01202 4 11283785 11297515 PCT