Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00943 ATGGATCCTTTTTTGAAGAAATTCTTCCCTGATGTGTACGCAAAGGAGCACAACATTAAGCCCACTGATAACCAATATTGTAAATTTGATAGCCAAGTGCTCACACTCTTCACTTCCTCTCTCTATTTGGCTGCTCTTGTGGCCTCAATATTTGCATCCAAGGTAACTCGAGCCTTCGGTAGGCGCCTCACCATGATCTCCGGCGGTGTTCTCTTTCTCGCCGGTGCAGCTTTGAACGGCTTCGCCCAGCAAGTCTGGATGCTTATTGTTGGCCGCATGTTGCTAGGTTTTGGAATCGGATGCGCCAATCAGTCTGTGCCGATCTACGTATCCGAGGTTGCTCCATACAAATACAGAGGAGCACTTAACATGTTGTTTCAATTGGCAATCACCATTGGCATTTTTGTTGCCAATATTCTGAACTACCTTTTTGCCAAGATGGAGAACGGCGAAGGGTGGCGCTATAGCTTAGGTTTGGCAGGAGTCCCTGCAATAATGATCATCATCGGTGCAATGTTTCTTCCTGAGTCTCCAAACTCGTTGATCGAGCGTGGACAAGCTGAGAAGGCCAAGGAGGAACTAATCAAGATTCGTGGAACCGATGATGTTGACGAGGAGTTTAAGGATCTTGTTGCTGCCAGTGAAGCCTCCAAACAGGTCAAGCATCCTTGGTCTTCTTTGCTCAAAAGTGAGTACAGGCCTCACCTCACCATGGCCATAGCCATTCCCTTCTTCCAACAACTCACTGGCATGAATGTCATCACATTCTATGCTCCTGTTTTGTTCAAAACTATTGGCTTTGGTGGAACTGCTTCCCTTATGTCTGCCATGATTACCGGAGGTTGTAACGCCCTTGCCACCCTTGTTTCCATCTTTACCGTTGACAAGGTTGGCAGACGAAAGCTTTTTCTCGAAGGTGGTGCTCAAATGTTTATCTGTCAGCTTGTGATCGCAGCTGCAATAGGTAGCAAATTTGGAACAGATGGAAACCCTGGAGTTCTTCCCAAGTGGTTTGCCTTAACTGTTGTGGTATTCATATGTATCTACGTGGCGGGATTTGCATGGTCGTGGGGTCCACTAGGATGGTTGGTACCCAGTGAAATATTCCCGCTTGAAGTTCGATCGGCGGCTCAGAGCGTCAACGTTTCAGTTAATATGATCTTCACCTTTGCCGTTGCCCAAGTTTTCACTGCGATGTTGTGCCATATGAAGTTCGGGCTCTTCATCTTCTTTGCATTCTTTGTGATTGTTATGAGTATCTTTATCTACAAGTTCTTGCCAGAGACAAAGGGTGTTCCCATTGAAGAAATTTCTCTTGTGTGGGAGAATCATCCATATTGGAACAAATTTGTCAAGTCCTCTGCTCAAAAGAACAAAACTGCTGCTCCAGATTCTCAAGTTTAG 1404 0.4587 MDPFLKKFFPDVYAKEHNIKPTDNQYCKFDSQVLTLFTSSLYLAALVASIFASKVTRAFGRRLTMISGGVLFLAGAALNGFAQQVWMLIVGRMLLGFGIGCANQSVPIYVSEVAPYKYRGALNMLFQLAITIGIFVANILNYLFAKMENGEGWRYSLGLAGVPAIMIIIGAMFLPESPNSLIERGQAEKAKEELIKIRGTDDVDEEFKDLVAASEASKQVKHPWSSLLKSEYRPHLTMAIAIPFFQQLTGMNVITFYAPVLFKTIGFGGTASLMSAMITGGCNALATLVSIFTVDKVGRRKLFLEGGAQMFICQLVIAAAIGSKFGTDGNPGVLPKWFALTVVVFICIYVAGFAWSWGPLGWLVPSEIFPLEVRSAAQSVNVSVNMIFTFAVAQVFTAMLCHMKFGLFIFFAFFVIVMSIFIYKFLPETKGVPIEEISLVWENHPYWNKFVKSSAQKNKTAAPDSQV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00943 467 CDD MFS_STP 1 428 IPR044778 GO:0015145|GO:0015749
Arst4g00943 467 ProSitePatterns Sugar transport proteins signature 1. 290 307 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst4g00943 467 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 430 IPR020846 GO:0022857
Arst4g00943 467 Pfam Sugar (and other) transporter 23 441 IPR005828 GO:0016020|GO:0022857|GO:0055085
Arst4g00943 467 Gene3D MFS general substrate transporter like domains 1 444 IPR036259 -
Arst4g00943 467 FunFam Sugar transport protein 13 1 444 - -
Arst4g00943 467 PRINTS Sugar transporter signature 343 364 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst4g00943 467 PRINTS Sugar transporter signature 366 378 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst4g00943 467 PRINTS Sugar transporter signature 89 108 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst4g00943 467 PRINTS Sugar transporter signature 246 256 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst4g00943 467 NCBIfam sugar porter family MFS transporter 29 437 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst4g00943 467 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 452 IPR045262 GO:0015144
Arst4g00943 467 ProSitePatterns Sugar transport proteins signature 2. 94 119 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst4g00943 467 SUPERFAMILY MFS general substrate transporter 28 437 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00943 Arst-Chr4 7633624 7638345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00943 1 458 Organic Solute Cotransporters AT1G11260 68.777 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00943 K24193 - gmx:100777241 719.924