Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00871 ATGGAGTACGTTGCAGATGATAATGAAATGGCAGAGGTAGAAGATGATGTGTATTTCCGAGGCAGAGCATTTGGTGAATCAGATTCGGATGATGATGATGAATACGATCCTTTGCAGGAAAATCGTATAACAGATACCACTGCCGCAGAAGCTAGGAAGGGAAAGGATATCCAAGGTATACCATGGGATAGACTGAGTATTAGTCGTGAAAAGTATAGACAAACTAGACTAGAGCAGTACAAGAATTATGAAAATATACCACAATCAGGGGAACTTTCGGAGAAGGAATGCAGGCCAACAGATAAAGGAGGAAGATTTTATGATTTCTGGCAGAACACTAGATCTGTGAAGTCAACGATACTTCATTTCCAACTACGGAACTTGGTTTGGTCAACATCGAAGCATGATGTATATCTTGTTTCACATTACTCAATTGTTCACTGGTCTTCGTTGCACTCCAAGAGATCCGAAATCCTGAATGTACAAGGGCATGTGGCTCCGTGTGAGAAACATCCTGGAAGCCTCTTGGAAGGGTTTACTCAAACACAAATTAGTACACTGGCAGTGCGAGACAACTTGTTGATTGCTGGAGGCTTTCAAGGAGAACTTATTTGCAAGTACTTAGATCGACCTGGGGTTAGCTTTTGTTCCAGAACTACTTATGAGGACAATGCGATCACAAATGCTGTCGAGATTTATGAGCATCCCAGGTCTTCATTCTTTTCTTTCTTATCACTCTTTTTTCATTTCATGGCTTCAAATAATGACTGTGGAGTCAGAGACTTTGATATGGAGAAATTTCAGCTTTCCAAGCATTTCTGCTTCCCCTGGCCTGTAAATCATACTTCATTGAGCCCTGATAGTAAACTTCTTGCAATTGTTGGAGACAATCCAGAAGGGCTGCTGGTGGATTCTCAAACTGGAAAGACAATCACGCAGTTATGTGGACACTTGGATTACTCATTTGCATCTGCATGGCATCCTGATGGCCGTATTTTTGCTACCGGGAACCAAGACAAAACTTGCCGTGTCTGGGATGTTCGAAACTTGTCGAAGTCTGTTGCTGTTCTGAAGGGCAACCTTGGAGCTATACGTTCAATACGTTTCACATCTGATGGGCAGTTCATGGCAATGGCTGAGCCAGCTGACTTTGTGCATGTCTTTGACGCAAAGCGTGGATTTGAGAAGGAACAGGAAATTGATTTTTTTGGGGAGATCTCTGGTGTATCTTTCAGTCCGGATACAGAATCACTCTTTATTGGTGTCTGGGACCGCACCTACGGAAGCCTTCTTCAGTACAACCGACACAGAAACTACTCGTATCTTGACTGCTTGTAA 1338 0.4283 MEYVADDNEMAEVEDDVYFRGRAFGESDSDDDDEYDPLQENRITDTTAAEARKGKDIQGIPWDRLSISREKYRQTRLEQYKNYENIPQSGELSEKECRPTDKGGRFYDFWQNTRSVKSTILHFQLRNLVWSTSKHDVYLVSHYSIVHWSSLHSKRSEILNVQGHVAPCEKHPGSLLEGFTQTQISTLAVRDNLLIAGGFQGELICKYLDRPGVSFCSRTTYEDNAITNAVEIYEHPRSSFFSFLSLFFHFMASNNDCGVRDFDMEKFQLSKHFCFPWPVNHTSLSPDSKLLAIVGDNPEGLLVDSQTGKTITQLCGHLDYSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGQFMAMAEPADFVHVFDAKRGFEKEQEIDFFGEISGVSFSPDTESLFIGVWDRTYGSLLQYNRHRNYSYLDCL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00871 445 MobiDBLite consensus disorder prediction 21 52 - -
Arst4g00871 445 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 5 444 - -
Arst4g00871 445 SMART WD40_4 393 434 IPR001680 GO:0005515
Arst4g00871 445 SMART WD40_4 307 346 IPR001680 GO:0005515
Arst4g00871 445 SMART WD40_4 350 389 IPR001680 GO:0005515
Arst4g00871 445 Pfam Uncharacterised protein domain (DUF2415) 362 398 IPR019417 -
Arst4g00871 445 Pfam WD domain, G-beta repeat 311 346 IPR001680 GO:0005515
Arst4g00871 445 FunFam WD-40 repeat family protein 219 443 - -
Arst4g00871 445 ProSiteProfiles Trp-Asp (WD) repeats profile. 314 355 IPR001680 GO:0005515
Arst4g00871 445 Gene3D - 236 443 IPR015943 GO:0005515
Arst4g00871 445 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 314 349 - -
Arst4g00871 445 SUPERFAMILY WD40 repeat-like 178 426 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00871 Arst-Chr4 7089670 7093356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00871 302 426 Miscellaneous Gene Families AT5G08390 28.000 3.71e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00871 - - gmx:100788712 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00871 4 7089670 7093356 Arst4g00871 4 7089670 7093356 ECH