Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00142 ATGGCGTCTGCTACAGCTCCTCCTCCTGTGGATCGTCCTGTTCGTGTCTACGCAGATGGAATTTATGATCTCTTCCACTTCGGCCATGCCCGTTCTCTCGAGCAAGCTAAGAAATCATTTCCGAACACGTACCTTCTAGTTGGATGCTGTAGCGATGCAGTGACCCACAAGTACAAAGGAAAAACCGTTATGACCGAGGATGAACGTTATGAATCTCTTCGTCACTGCAAATGGGTGGATGAAGTCATTCCAGATGCACCTTGGGTTATCAATCAAGAGTTTCTTGACAAGCACAAAATTGACTATGTCGCTCATGATTCTCTTCCATATGCAGATACCAGTGGTGCAGGAAATGATGTTTATGAATTTGTTAAGGCTGTTGGAAAATTTAAGGAAACGAAACGGACTGAAGGGATATCTACTTCAGATGTGATAATGAGGATTGTAAAAGATTATAACCAATATGTATTACGAAACTTGGATCGTGGCTACTCAAGGAAAGATCTTGGTGTAAGCTATGTTAAGGAAAAGCGATTGAGAGTGAATAGGAGGTTGAAAACCTTACAAGAGAAAGTAAAAGAACAACAAGAAAAGATTCAAATTGTTGCAAAGAATGCTGGTATGCATCCTAATGAATGGGTGGAAAATGCTGATCGTTTGGTTGCTGGATTTTTAGAGATGTTTGAAGAAGGTTTTCATAAGATGGGGACAGTGATCATAGATCAAATTCAAGAAAGGTTAAGAGGTCCACAATCAGCTGCATTTCATTTAGAAAGTGGAGAGGGTGATAAAGATGATGATAAGGAAGAGTATTATGATGATGATGAAGATGATAGTGATGAAGAATATTTTGAAGAGTATTTTGGTGATGAAGAACTCAATCCCCATATTATTGAAAAGGATGAGAAGAAAACATAG 918 0.3911 MASATAPPPVDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDAVTHKYKGKTVMTEDERYESLRHCKWVDEVIPDAPWVINQEFLDKHKIDYVAHDSLPYADTSGAGNDVYEFVKAVGKFKETKRTEGISTSDVIMRIVKDYNQYVLRNLDRGYSRKDLGVSYVKEKRLRVNRRLKTLQEKVKEQQEKIQIVAKNAGMHPNEWVENADRLVAGFLEMFEEGFHKMGTVIIDQIQERLRGPQSAAFHLESGEGDKDDDKEEYYDDDEDDSDEEYFEEYFGDEELNPHIIEKDEKKT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00142 305 SUPERFAMILY Nucleotidylyl transferase 15 146 - -
Arst4g00142 305 Gene3D HUPs 1 230 IPR014729 -
Arst4g00142 305 MobiDBLite consensus disorder prediction 256 281 - -
Arst4g00142 305 CDD CCT 12 163 IPR041723 -
Arst4g00142 305 PANTHER CYTIDYLYLTRANSFERASE 4 281 IPR045049 GO:0004105|GO:0006657
Arst4g00142 305 Coils Coil 178 205 - -
Arst4g00142 305 FunFam Choline-phosphate cytidylyltransferase 2 1 230 - -
Arst4g00142 305 Pfam Cytidylyltransferase-like 17 146 IPR004821 GO:0003824|GO:0009058
Arst4g00142 305 MobiDBLite consensus disorder prediction 264 281 - -
Arst4g00142 305 NCBIfam cytidyltransferase-like domain 15 82 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00142 Arst-Chr4 928569 931790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00142 40 285 Acyl Lipid Metabolism Gene Families AT2G32260 74.206 9.95e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00142 K00968 - gmx:100803699 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00142 4 928569 931790 Arst4g00142 4 928569 931790 ECH