Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05994 ATGGGCACCAATCAGAGTGAAGTTGAGAGGAAGAGTGAGAAAGAGCTCAAGCATCTTGGCTTTGTGAGGATTGCAGCGATTCAAGCCTTTGTTTGCGTCTCAAATCTCTATCAATACGCCAAGCATAACTCTGGCTCTCTCAGATCTGCCGTTGGAACGGTTGAAGGGACTGTTTCCGCCGTTCTCGGCCCCGTATACAACAAATTCAGGGATGTCCCCGACGATCTCCTTGTTTTTGTCGATAACAAGGTGGATGAAGCTAGCCAGAAATTCGAGGAGCATGCACCTCCATTAGTGAAGCAGGTAGCAAGGCAAGCAAAGGGGTTGATTGAGGAAGTGACACAGAAAGCAGAGAAGGTTGTGAGTGAGGCTCAATCCGGAGGAGCAAAAGCAGCTGCACATTATGTTGCTGAGGAGTCCAAGCACATTGTGCTAACTGGCTCAGTTAAATTGTGGAACGGTCTAAACCACTATCAACTGTTCCATGCAGTGGCAGAGATGGCTGTTCCCACTGCTGCACACTGGTTGGAAAGCTACAACCATGTGGTTGAGGACATGACTGCTAAGGGTTATGGTGTTTTTCAGTATTTGCCTTTGGTTCCAATTGATGAGATAGCCAAGGCATTTAAACAGGGAAAAGGAGAAGCGAATGTCAATGAGAATGGAGATGGAGGTGTCATTACTGGACAGATAGCACAATCTGAGTAA 708 0.4703 MGTNQSEVERKSEKELKHLGFVRIAAIQAFVCVSNLYQYAKHNSGSLRSAVGTVEGTVSAVLGPVYNKFRDVPDDLLVFVDNKVDEASQKFEEHAPPLVKQVARQAKGLIEEVTQKAEKVVSEAQSGGAKAAAHYVAEESKHIVLTGSVKLWNGLNHYQLFHAVAEMAVPTAAHWLESYNHVVEDMTAKGYGVFQYLPLVPIDEIAKAFKQGKGEANVNENGDGGVITGQIAQSE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05994 235 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 12 216 IPR008802 -
Arst3g05994 235 Pfam Rubber elongation factor protein (REF) 11 211 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05994 Arst-Chr3 133480526 133482165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05994 - - tpra:123914274 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05994 3 133480526 133482165 Arst3g05994 3 133480526 133482165 ECH
Arst10g00867 10 7711034 7713074 Arst3g05994 3 133480526 133482165 PCT