Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05814 ATGCTGCTTTTCCTCCGCAACTTCTTCTACACCGGTCGCAGGGCCTCACCTTCAGTAAGCTCCTTCTCTTACTTCTTTCACCAAAACCCTACGCACTCATTTCCTGTTATCTTCACTGCTTCAACCCCATCATCTCAAAATCCAAACTTTGCTTGCCCTGTCATCTGGTTCACCGGTTTTATGTGTGTTATCAGATACCCTTTTTCCTCAAAACCTTCTTTTGATGACATTGCTTCTGAATCAGTGCGTAGTTTCTTGCAACAACAGGATAGTCCTCTAATTGATAGAATCTTTGATTCTGCATTGGCACCGGTTTTGGTGCCTAAAATTTTGGAGAAGTTACAAGGGGACCCCGTATCAGCATTGAGGTTTTTCCAGTTGGCAGGGACTCGAACCGGGTTTCGGCACACTACAGAGTCTTATTGCATCCTGGCTCATATTTTGTTTCGTGAGAAATTTTATTTTGATGCAAAGAGAATCATCAGGGAGTGGATTTTGCTTAGGGGGGAGTTTCCGGGTTGTGATTTTTTTGATATGTTGTGGTTGACTAGGAATGTTTGTAGGTCAGGCTTTGGAGTTTTTGATACTTTGTTTAGTGTTTTTGTTGAGTTGGGAATGCTTGAGGAAGCTAGCCAATGCTTTTTGAAGATGGCAAACTTCAAGGTTTTGCCTAAGGTGCGTTCTTGTAATGAGCTTCTGCATAGACTTGCAAAGTCAGGCAAAGGGAAATCGTCAATGAATTTTTTCAATGACATGCTTGGGGCCGGCCTTTCGCCCTCAGTTTATACATATAATATAGTGATAGGTTATTTAGCCAAAGAAGGGGAGTTACAAACTGCTAGGAATTTTTTCAAACTGATGAAACAGACAGGTCTTACACCAGACACAGTCACGTATAATTCTCTCATCGATGGGTATGGAAAGGTAGGTTGCTTAGCTGAGGCAATAAGTTTACTTGAGGAAATGAAAGATGCAGGATGTGAGCCGGATGTCATAACTTACAACTCCTTAATAAATTGTTTCTGTAAATATGAAAGAATTCCTCAAGCTTTTGAGTATTTGCATGAGATGAAGGAAAGAGGGCTAAGACCAAATGTTGTAACGTACAGTACTCTAATTGATGCATTTTGCAAGGCTGGCATGATGCTAGAAGCAATGAAATTTTTTGTTGACATGATACGTGTTGGTCTTCAACCCAATGAATTTACTTATACATCTCTGATTGATGCAAATTGTAAAATCGGTGATTTGGATGAAGCATTCAAACTGGCAAATGAGATGTTGCAGGCTGGACTTGATCTAAATGTTGTCACACACACTGCATTGCTGGATGGCCTCTGTGAAGATGGCAGAATGAAAGAAGCCGAGGAATTATTTAAGGCCTTGTTGAAAGCTGGAGTGGCTCCTAATCAGCAAACCTATACTGCCCTTTTTCATGGATATATTAAGGCTAAGATGCTAGAAAATGCCAAGGATATTTTAGAGGAAATGAACAAGAAAGACTTCAAACCAGATCTTTTGCTGTACGGAACCAGAATATGGAGCCTTTGCAGCCAGAATAAGATACAAGAATCTGAAGCCGTAATACGTGAGATGATGGAGTCTGGTCTGACTGCAAATAGTTATACACAAACAACCATTATGGATGGATATCTTAAAGCTGGGAAAACCACAGAAGCAGTAAATATTTTACATGAAATGCAGGAATCGGGTATCAAAGCAACAGTTGTAACATTTGGTGCTCTAATAGATGGTTTGTGCAAGAAGGGATTAGTTGAGCAGGCTGTTAATTACTTTGGATGCATGACTAGCATTGGTCTGCAACCGAATATAATGATTTATACTGCTCTAATTGATGGACTTTATAAAAATGGTTTTGTTGAAGCAGCCAATAAGCTGTTCAATGAAATGCTGGATAAGGGAATCAGTCCAGATAAATTAGTTTACACTGCTTTGATTGATGGGAATCTGAAGCAGGGAAATCCTCAAGAAGCTTTGAGAGTGCAAAATAGAATGGTGGAAATGGGTATGGAGTTAGACCTGCATGCTTATACTTCACTTGTCTCGGGTTTTTCTCGTTGTGGTCAATTGCAGCAAGCTAAGTCATTTCTTTATGAGATGCTTGAAAAGGGTATCATTCCTGATGAGGTTCTTCTTATTTGTCTGCTGAGGAGATATTATCAGATAGGAGACAATAATGAAGCTAAGGCACTTCATAATGATATGATGTGTAGGGGACTAATTGCTTCGACTCTTGATATAAGTGTTCCCTCTGTGTGCACTTGA 2286 0.3994 MLLFLRNFFYTGRRASPSVSSFSYFFHQNPTHSFPVIFTASTPSSQNPNFACPVIWFTGFMCVIRYPFSSKPSFDDIASESVRSFLQQQDSPLIDRIFDSALAPVLVPKILEKLQGDPVSALRFFQLAGTRTGFRHTTESYCILAHILFREKFYFDAKRIIREWILLRGEFPGCDFFDMLWLTRNVCRSGFGVFDTLFSVFVELGMLEEASQCFLKMANFKVLPKVRSCNELLHRLAKSGKGKSSMNFFNDMLGAGLSPSVYTYNIVIGYLAKEGELQTARNFFKLMKQTGLTPDTVTYNSLIDGYGKVGCLAEAISLLEEMKDAGCEPDVITYNSLINCFCKYERIPQAFEYLHEMKERGLRPNVVTYSTLIDAFCKAGMMLEAMKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLDEAFKLANEMLQAGLDLNVVTHTALLDGLCEDGRMKEAEELFKALLKAGVAPNQQTYTALFHGYIKAKMLENAKDILEEMNKKDFKPDLLLYGTRIWSLCSQNKIQESEAVIREMMESGLTANSYTQTTIMDGYLKAGKTTEAVNILHEMQESGIKATVVTFGALIDGLCKKGLVEQAVNYFGCMTSIGLQPNIMIYTALIDGLYKNGFVEAANKLFNEMLDKGISPDKLVYTALIDGNLKQGNPQEALRVQNRMVEMGMELDLHAYTSLVSGFSRCGQLQQAKSFLYEMLEKGIIPDEVLLICLLRRYYQIGDNNEAKALHNDMMCRGLIASTLDISVPSVCT 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05814 761 Gene3D Tetratricopeptide repeat domain 450 571 IPR011990 GO:0005515
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 295 329 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 400 434 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 610 644 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 435 469 IPR002885 -
Arst3g05814 761 Pfam PPR repeat 194 218 IPR002885 -
Arst3g05814 761 Pfam PPR repeat 509 537 IPR002885 -
Arst3g05814 761 Pfam PPR repeat 683 712 IPR002885 -
Arst3g05814 761 Gene3D Tetratricopeptide repeat domain 346 449 IPR011990 GO:0005515
Arst3g05814 761 Gene3D Tetratricopeptide repeat domain 255 345 IPR011990 GO:0005515
Arst3g05814 761 Gene3D Tetratricopeptide repeat domain 572 673 IPR011990 GO:0005515
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 505 539 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 260 294 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 330 364 IPR002885 -
Arst3g05814 761 PANTHER PPR_LONG DOMAIN-CONTAINING PROTEIN 314 540 - -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 470 504 IPR002885 -
Arst3g05814 761 Pfam PPR repeat family 545 588 IPR002885 -
Arst3g05814 761 Pfam PPR repeat family 435 482 IPR002885 -
Arst3g05814 761 Pfam PPR repeat family 609 655 IPR002885 -
Arst3g05814 761 Pfam PPR repeat family 329 378 IPR002885 -
Arst3g05814 761 Pfam PPR repeat family 263 307 IPR002885 -
Arst3g05814 761 SUPERFAMILY HCP-like 258 509 - -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 680 714 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 683 716 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 577 604 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 367 401 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 473 505 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 648 680 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 437 470 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 542 575 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 402 435 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 332 366 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 613 645 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 262 296 IPR002885 -
Arst3g05814 761 NCBIfam pentatricopeptide repeat 297 331 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 575 609 IPR002885 -
Arst3g05814 761 Pfam PPR repeat 396 427 IPR002885 -
Arst3g05814 761 Gene3D Tetratricopeptide repeat domain 80 254 IPR011990 GO:0005515
Arst3g05814 761 Gene3D Tetratricopeptide repeat domain 674 744 IPR011990 GO:0005515
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 645 679 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 225 259 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 365 399 IPR002885 -
Arst3g05814 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 540 574 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05814 Arst-Chr3 131755472 131759856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05814 256 756 Glycosyltransferase AT1G05670 28.827 2.98e-68 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05814 K17710 - gmx:100786756 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05814 3 131755472 131759856 Arst3g05814 3 131755472 131759856 ECH