Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05439 ATGAACTGTTTCTTAGTGTCACTCGTCTCTCTCTGCCCGCTCCTCCTTGCTCTCTGTGCTCAGAGTGTGTCATCTCGAAATGTGTCTGAAAGTTACCTACAGCAAGCTAGCTTCCCACCAAGAGGTTGGAATTCATATGATTCCTTTGGCTGGACAGTTTCTGAAGAAGAATTCTTACAGAATGCTGGAATAGTTTCTCGGAGCCTCAAAGCTCATGGATACAAGTATGTTGTTGTGGATTACCTCTGGTATAGGAAGAATGTCCAAGGTGCTTATTCGGATTCTCTTGGATTTGATGTGATTGATGAGTGGGGGAGGATGATCCCTGACCCCGGAAGGTGGCCTTCGTCCACAGGTGGGAAGGGATTCAGTGAAGTAGCCAATAAAGTACACAACATGGGTTTGATGTTCGGAATTCATGTTATGAGAGGGATAAGCACACAAGCAGTCAATGCAAACACCCCTATCCTAGACACAACAAAGGGGGGTGCTTATCAAGAGTCTGGTCGAGTATGGCATGCAAAAGACATAGCATTGCCGGGAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTGAATACACAGTTGGGGGCTGGGAGAGCCTTTTTGAGATCCCTTTATGAGCAGTATGCTGCATGGGGTGTTGATTTTGTGAAACATGATTGTGTGTTTGGTGCTGACTTGGATTTAAATGAAATAACCTATGTATCAGGGGTTCTCCGGGAGCTTAACCGTCCCATTGTATATTCTCTATCTCCTGGAACTAGTGTGACACCAGCATTGGCCAAGGATGTCAGTGGGCTAGTAAACATGTATCGTATAACAGGAGATGACTGGGATAACTGGGGTGATGTCAAATCTCATTTTGATATATCAAGGGATTTATCTGCAGCTAGTATGATAGGAGCAAAAGGTTTAAATGGGAATTCATGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGTTCCAATCAAGGTCCACACAGGTTTAGTAAACTCAGTCTAGAAGAGAAGAGGACACAGATGACATTGTGGTCCATGGCCAAGTCGCCCCTCATGTATGGTGGAGATCTGCGGAAAATTGATATTGTCACATATAGTCTTATCACGAATCCTATCCTGCTGGAAATTAATTCTTTCAGCTCAAGTAACAGGGAGTTTCCTGATGTCACAAGTTCTGAGAACTTGAATCATAAAGACCATCATCTTAGAGTGAAGAAAAGAAGATCTAAGAGAGGAGGGAAGCCATCATATACACATGCATTACGTCTCACTGGCTGCAGTGAACCAAAGGCAATGGGTTGGTCTGTTGAAAGTCTCAACGAAGATCTTGAAAGAATCTGTTGGAAAAGAAGTTTAGAAAACCAGCTTCCTCCTTTCTGTGTACACAAGAGAGAATTTCAGTTCAAATTAGATGGCGAGAGTACGCATCAAGAGGACTATCGGGGTAAACATCATTTAGTTGCAACCAACGAAATGAAATTCTGCTTGGATGCTTCCCCAAGACAAAAGCTTACTTCTAAGGAGTTCAAGAGTGGTACATTTTCTCCTTGCAGATGGGATGCAAATCAGATGTGGAAGCTGAATCCAAATGGGACCATGGTAAACAGTTACTCCGGTCTGTGTGCAATAGCAGAATCTGCCAAAGATGGTATTAGTCCTGGTGGGATTCGCTCTTGGATTGCAAAAGGAAGAAGAGGTGAAGTGTATGTTGCTTTCTTCAATTTAAGTGAACAAAAGACAGTGATAAGTACAAAGACATCGTCTCTGGGTAATGCTTTTGCTGATAGAACAAGCATCACTTCCTGCCATGGCAAGGAAGTTTGGAGTGGAAAGCAAGTCATAACAACTCAGGGAACTTTATCAGCTGAAGTGGGACTTCACGGATGTGCCTTATTTGTTCTCAATTGCCACTAG 1935 0.4357 MNCFLVSLVSLCPLLLALCAQSVSSRNVSESYLQQASFPPRGWNSYDSFGWTVSEEEFLQNAGIVSRSLKAHGYKYVVVDYLWYRKNVQGAYSDSLGFDVIDEWGRMIPDPGRWPSSTGGKGFSEVANKVHNMGLMFGIHVMRGISTQAVNANTPILDTTKGGAYQESGRVWHAKDIALPGRACAWMPHGFMSVNTQLGAGRAFLRSLYEQYAAWGVDFVKHDCVFGADLDLNEITYVSGVLRELNRPIVYSLSPGTSVTPALAKDVSGLVNMYRITGDDWDNWGDVKSHFDISRDLSAASMIGAKGLNGNSWPDLDMLPFGWLTDPGSNQGPHRFSKLSLEEKRTQMTLWSMAKSPLMYGGDLRKIDIVTYSLITNPILLEINSFSSSNREFPDVTSSENLNHKDHHLRVKKRRSKRGGKPSYTHALRLTGCSEPKAMGWSVESLNEDLERICWKRSLENQLPPFCVHKREFQFKLDGESTHQEDYRGKHHLVATNEMKFCLDASPRQKLTSKEFKSGTFSPCRWDANQMWKLNPNGTMVNSYSGLCAIAESAKDGISPGGIRSWIAKGRRGEVYVAFFNLSEQKTVISTKTSSLGNAFADRTSITSCHGKEVWSGKQVITTQGTLSAEVGLHGCALFVLNCH 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05439 644 PRINTS Glycosyl hydrolase family 27 signature 33 52 IPR002241 GO:0004553|GO:0005975
Arst3g05439 644 PRINTS Glycosyl hydrolase family 27 signature 127 148 IPR002241 GO:0004553|GO:0005975
Arst3g05439 644 PRINTS Glycosyl hydrolase family 27 signature 342 363 IPR002241 GO:0004553|GO:0005975
Arst3g05439 644 Gene3D - 555 643 IPR013780 -
Arst3g05439 644 SUPERFAMILY (Trans)glycosidases 36 384 IPR017853 -
Arst3g05439 644 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 10 643 IPR002241 GO:0004553|GO:0005975
Arst3g05439 644 Pfam Alpha galactosidase A 210 384 IPR002241 GO:0004553|GO:0005975
Arst3g05439 644 CDD GH27 39 384 IPR002241 GO:0004553|GO:0005975
Arst3g05439 644 Gene3D Aldolase class I 17 386 IPR013785 -
Arst3g05439 644 Pfam Alpha galactosidase C-terminal beta sandwich domain 562 641 IPR041233 -
Arst3g05439 644 SUPERFAMILY Ricin B-like lectins 496 549 IPR035992 -
Arst3g05439 644 SUPERFAMILY Glycosyl hydrolase domain 558 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05439 Arst-Chr3 129102522 129108281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05439 7 472 Glycoside Hydrolase AT3G26380 64.059 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05439 - - gmx:100783705 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05439 3 129102522 129108281 Arst3g05439 3 129102522 129108281 ECH