Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05412 ATGGAAGAACACATAGCATGCAGCAGTGAGCTTGCAGGTGTTAATATAATTTCAAGCTGGTGCTTCCTAATCGGCTTGTTGGTGACGCTGAAGCACTTGATCTCCCTTTCCAAATGGATCTTCGCCACCTTTCTCAGATCCCAAATAGACCTAATCAGAACCTACGGTTCCTGGGCCATGGTCACCGGAGCAACCGACGGAATCGGAAAAGCCATGGCTCACCGCTTAGCACACCGAGGACTCAACATCATCCTCGTCAGCAGATCCTCCAAGAGGCTCCAAACCGTCGCAACTGAACTCCAAGCACACCACCCTCACATCCTCGTCAAGGCCATCCAGATGGACTTCTCCGGCGACATAGCGGAGGGTCTCCGGCAAATAGCGGCGGCCACACGCGAATTGGACCTCGGGATACTGATCAACAACGTGGGGATCACGTACCCTGGGGCTATGTTCTTTGACCAAGTGGAAGAGAAGGTGTGGAGGAAGATCTTAAAGGTGAATGTGGAAGGAACGACGAGGGTGACGAGAGCGGTGGTGGCCGGAATGATGGAGCGGAGAAGAGGTGCAATCATCAACATTGGATCTGGTGCTTCCGTCGTCATTCCTTCGCATCCTCTCTATTCCATCTATGCTGCTTCAAAGGCTTACGTGGATCAGCTATCAAGATCTCTGCACGTCGAGTACAAACAGTATGGGATTCACGTCCAGTGTCAGGTACCACTTTATGTAGCAACGAAGATGGCATCAGAGATAGCATGTATAGAGAAAGATTCACTTTTCATTCCAACACCAGAGGCTTATGCAAAAGCGGCCGTTCGTAAAATTGGGCATGGGCCAAGGTGCACTCCTTATTGGGCTCACTCTATTCAGTGGTTCTTTGCAGGCTTAGCCCCGGACCCACTTCTCGATGCTTGGCGCTTTTCTATCGCAATGCGCCGCTGGAAAGGAATCTAA 957 0.511 MEEHIACSSELAGVNIISSWCFLIGLLVTLKHLISLSKWIFATFLRSQIDLIRTYGSWAMVTGATDGIGKAMAHRLAHRGLNIILVSRSSKRLQTVATELQAHHPHILVKAIQMDFSGDIAEGLRQIAAATRELDLGILINNVGITYPGAMFFDQVEEKVWRKILKVNVEGTTRVTRAVVAGMMERRRGAIINIGSGASVVIPSHPLYSIYAASKAYVDQLSRSLHVEYKQYGIHVQCQVPLYVATKMASEIACIEKDSLFIPTPEAYAKAAVRKIGHGPRCTPYWAHSIQWFFAGLAPDPLLDAWRFSIAMRRWKGI 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05412 318 CDD 17beta-HSD1_like_SDR_c 56 299 - -
Arst3g05412 318 Pfam short chain dehydrogenase 58 252 IPR002347 -
Arst3g05412 318 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 198 226 IPR020904 GO:0016491
Arst3g05412 318 FunFam Hydroxysteroid (17-beta) dehydrogenase 3 52 283 - -
Arst3g05412 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 310 IPR036291 -
Arst3g05412 318 Gene3D - 50 285 - -
Arst3g05412 318 PANTHER RH59310P 19 313 - -
Arst3g05412 318 PRINTS Glucose/ribitol dehydrogenase family signature 183 199 IPR002347 -
Arst3g05412 318 PRINTS Glucose/ribitol dehydrogenase family signature 134 145 IPR002347 -
Arst3g05412 318 PRINTS Glucose/ribitol dehydrogenase family signature 58 75 IPR002347 -
Arst3g05412 318 PRINTS Glucose/ribitol dehydrogenase family signature 232 249 IPR002347 -
Arst3g05412 318 PRINTS Glucose/ribitol dehydrogenase family signature 211 230 IPR002347 -
Arst3g05412 318 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 145 IPR002347 -
Arst3g05412 318 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 211 230 IPR002347 -
Arst3g05412 318 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 189 197 IPR002347 -
Arst3g05412 318 PIRSF 11-beta-HSD1 7 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05412 Arst-Chr3 128937313 128940986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05412 21 314 Lipid Metabolism Gene Families AT1G24470 61.017 1.04e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05412 K10251 - qsa:O6P43_030543 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05412 3 128937313 128940986 Arst3g05412 3 128937313 128940986 ECH
Arst3g05412 3 128937313 128940986 Arst10g00975 10 9437335 9439953 PCT