Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05346 ATGCGTGGGCGATCAAGGAGCGTGTTATTGTGCGTGTGTGTGGTGATAGGGATCTTATGTGTGTTCCCAATCACTCTGAGGGCGCGCCCCTTCGTCCTCGTCCTATCTCAGGAGGACTTCAAGGATGCCCCCGCCGACGACTCATCCGCCGCCGCGGATCCCGAATCCTCCGCCGACTGGGATGACTTCGGCGACTCCGACCCCCACAAGTCCGAGCACGAGCTTGACCCCGATTCATGGCGCCCCATCTTCGAGCCTGATTTTCCCCTCTCCCCCAACCCTCCCTCCGACTCCGAGGCCCTCTACTACTCCGGCATCTCTAAGATCATGTCCGCCGCCACCTCTGCCGACGTCAGGCTCAGCGAGGAGGGCGCCGCTGAGATCGAGGCTGCAGCGGAGTCCGGGTACCCGGGGGCGCAGTCGGTGCTAGGGTTTTTGTCCGGAATGGGTCTCCTTCGAGAGAGGAGCAAATCAAAGGCGTTCCTGTACCATCACTTTGCCTCTGATGGTGGCAACATGCAGTCCAAGATGGCCTTGGCCTATATCTACACTCGCCAAGATATGTTTGAGAAAGCTGTGAAGATTTATGCTGAGCTAGCTGAAGTAGCTGTGAATAGTTTCTTGATTTCAAAAGACTCCCCGGTAATTGAACCTATTAGGCTTCATAATGGGGCCGAGGAGAATAAGGAAGCTCTCAGAAAATCAAAAGGGGAGGAGGATGAGGACTTCCAGATTCTGGAGTACCAGGCCCAGAAGGGGAATGCAGGAGCCATGTACAAAGTTGGCCTCTTTTACTACTTTGGCCTCCGGGGATTGCGCCGCGACCATTCCAAGGCACTCTCCTGGTTCTTGAAGGCCGTTGAGAAGGGAGAACCCAGGTCCATGGAACTTCTTGGGGAGATATATGCTAGGGGCGCTGGTGTGGAGAGGAACTACACAAAGGCCCTTGAATGGCTTACCCTTGCATCCAAACAACAGCTATATTCTGCTTATAACGGGATGGGTTATTTGTATGTCAAGGGGTATGGAGTCGACAAGAAGAATTACACTAAAGCAAAAGAGTACTTTGAAAAGGCTGCTGATAATGACGAGGTTGGAGGGCACTATAACTTGGGTGTCATGTATCTCAAAGGAATTGGAGTGAAAAGAGACGTGAAACTAGCATGTAAGTTCTTTATAGTGGCTGCTAACCAAGGTCAACCAAAGGCATTCTACCAGCTGGCGAAGATTTTCCATATTGGTGTTGGATTCAAGAAGAACATACCCTTGGCTACTGCTCTGTACAAACTTGTTGCAGAGCGGGGTCCATGGAGTTCTTTGTCTAGATGGGCACTGGAATCATACTTAAAAGGTGATGTTGGCAAGGCATTCTTGTTGTATTCAAGAATGGCTGAGTTGGGCTATGAGGTGGCACAAAGTAATGCTGCATGGATTCTTGACAAATATGGTGAGCGTAGCATGTGCTTGGGGGAATCTGGATTTTGCACTGATGCAGAAAGGCATCAGCGTGCACATTCTCTGTGGTGGCAAGCTTCTGAGCAGGGTAATGAACATGCTGCTTTACTCATTGGAGATGCATATTACTATGGTCGGGGTACTACCAGGGATTATGAGCGAGCTGCTGAGGCTTACATGCATGCCAAGTCACAATCAAATGCACAAGCCATGTTCAATCTTGGATACATGTATGAGCACGGGCAAGGACTTCCATTTGACCTTCATCTAGCCAAGCGATACTATGATGAAGCTCTAGAGCATGATCCTGCAGCAAAGTTGCCGGTCACACTAGCTCTTACAAGTTTGTGGGTTCGTAAGAACTATGCTGACAGTTTCTTGGTCCATCTGATAGATTCTTTGCCAGAAGTCTATCCCAAATTAGAGGCATGGGTGGAGAATGTACTTTTGGAGGAGGGAAATGCTACAATTCTCACCCTCTTTGCATGCCTCTTAACTGTGCTATATCTCCGGGAGAGGCAACGAAGGCAGGGTGCTGTTTTGGCTGGAGAGGTGGCACAGCAAAATCACCCTAATGACATCAGAGTGCCAGCACCAAATTAG 2058 0.501 MRGRSRSVLLCVCVVIGILCVFPITLRARPFVLVLSQEDFKDAPADDSSAAADPESSADWDDFGDSDPHKSEHELDPDSWRPIFEPDFPLSPNPPSDSEALYYSGISKIMSAATSADVRLSEEGAAEIEAAAESGYPGAQSVLGFLSGMGLLRERSKSKAFLYHHFASDGGNMQSKMALAYIYTRQDMFEKAVKIYAELAEVAVNSFLISKDSPVIEPIRLHNGAEENKEALRKSKGEEDEDFQILEYQAQKGNAGAMYKVGLFYYFGLRGLRRDHSKALSWFLKAVEKGEPRSMELLGEIYARGAGVERNYTKALEWLTLASKQQLYSAYNGMGYLYVKGYGVDKKNYTKAKEYFEKAADNDEVGGHYNLGVMYLKGIGVKRDVKLACKFFIVAANQGQPKAFYQLAKIFHIGVGFKKNIPLATALYKLVAERGPWSSLSRWALESYLKGDVGKAFLLYSRMAELGYEVAQSNAAWILDKYGERSMCLGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTTRDYERAAEAYMHAKSQSNAQAMFNLGYMYEHGQGLPFDLHLAKRYYDEALEHDPAAKLPVTLALTSLWVRKNYADSFLVHLIDSLPEVYPKLEAWVENVLLEEGNATILTLFACLLTVLYLRERQRRQGAVLAGEVAQQNHPNDIRVPAPN 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05346 685 SMART sel1 292 327 IPR006597 -
Arst3g05346 685 SMART sel1 517 552 IPR006597 -
Arst3g05346 685 SMART sel1 328 364 IPR006597 -
Arst3g05346 685 SMART sel1 137 172 IPR006597 -
Arst3g05346 685 SMART sel1 553 588 IPR006597 -
Arst3g05346 685 SMART sel1 255 291 IPR006597 -
Arst3g05346 685 SMART sel1 401 436 IPR006597 -
Arst3g05346 685 SMART sel1 365 400 IPR006597 -
Arst3g05346 685 MobiDBLite consensus disorder prediction 62 79 - -
Arst3g05346 685 FunFam ERAD-associated E3 ubiquitin-protein ligase component HRD3A 220 331 - -
Arst3g05346 685 Gene3D Tetratricopeptide repeat domain 217 330 IPR011990 GO:0005515
Arst3g05346 685 SUPERFAMILY HCP-like 346 476 - -
Arst3g05346 685 Gene3D Tetratricopeptide repeat domain 331 445 IPR011990 GO:0005515
Arst3g05346 685 SUPERFAMILY HCP-like 236 362 - -
Arst3g05346 685 MobiDBLite consensus disorder prediction 43 79 - -
Arst3g05346 685 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 8 666 IPR044623 GO:0030433
Arst3g05346 685 Pfam Sel1 repeat 519 541 IPR006597 -
Arst3g05346 685 Pfam Sel1 repeat 553 587 IPR006597 -
Arst3g05346 685 Pfam Sel1 repeat 139 172 IPR006597 -
Arst3g05346 685 Pfam Sel1 repeat 368 399 IPR006597 -
Arst3g05346 685 Pfam Sel1 repeat 256 290 IPR006597 -
Arst3g05346 685 Pfam Sel1 repeat 329 363 IPR006597 -
Arst3g05346 685 Pfam Sel1 repeat 450 468 IPR006597 -
Arst3g05346 685 Pfam Sel1 repeat 293 325 IPR006597 -
Arst3g05346 685 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 8 666 IPR044623 GO:0030433
Arst3g05346 685 SUPERFAMILY HCP-like 448 589 - -
Arst3g05346 685 SUPERFAMILY HCP-like 126 202 - -
Arst3g05346 685 Gene3D Tetratricopeptide repeat domain 446 606 IPR011990 GO:0005515
Arst3g05346 685 Gene3D Tetratricopeptide repeat domain 98 212 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05346 K14026 - gmx:732556 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05346 3 128460698 128465900 Arst3g05346 3 128460698 128465900 ECH