Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05298 ATGGGGAGTCCGGGACTGAGCAATCGAAATAATGGACAGCAGCAACGATTAGGCATTACTGAGCCCATTTCATTGGGCGGACCAACTGAGTATGATGTGATCAAGACTCGGGAACTCGAAAAGTACTTGCAAGATGCTGGCTTGTACGAGAATCAGGAGGAGGCAGTTAGTAGGGAGGAAGTTCTTGGCAGGCTAGATCAGATTGTGAAGATTTGGGTCAAAACCATTAGCCGTGCAAAGGGACTCAATGACCAACTGGTGCAAGAAGCAAATGCCAAGATTTTCACCTTTGGCTCCTATCGATTAGGGGTCCATGGCCCTGGAGCTGATATAGACACGCTTTGTGTGGCACCTAGGCATGTATCCAGAGAAGAAGATTTCTTTGGTGAACTACATAGGATGCTGTCTGAGATGCCAGAAGTAACAGAGTTGCACCCTGTGCCTGATGCTCATGTTCCAGTGATGGGGTTCAAGTTCAATGGTGTTTCTATTGATCTCCTTTATGCAAGATTGTCTTTGTGGGTTATTCCTGAGGACTTGGATATATCACAGGAGTCAATATTACAAAATGCAGATGAACAAACTGTTCGTAGTCTTAATGGTTGTAGAGTGACTGATCAAATCCTGCGTTTGGTTCCAAATATTCAGAATTTTCGCACAACATTGAGATGCATGAGATTTTGGGCAAAGCGACGTGGTGTCTATTCAAATGTTTCTGGTTTTTTGGGTGGTATAAACTGGGCATTGCTGGTTGCTCGAATATGTCAGTTATTTCCAAATGCACTTCCAAATATGTTAGTGTCTAGGTTCTTTAGGGTGTATACTCAGTGGCGTTGGCCGAACCCTGTCCTGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTCCAAGTTTGGGATCCTAGAAGATATCCCAAGGATAGATTCCATCTAATGCCGATAATTACTCCTGCTTATCCTTGCATGAACTCTAGCTACAATGTTTCATCAAGTACATTGCGTATTATGACAGAGGAGTTTCAGAGGGGAAATGAAATATGTGAGGCAATGGAGGCGAACAATGCCAATTGGGATGCTCTTTTTGAGCCTTATCCATTTTTTGAAGCTTATAAGAATTATCTGCAGATAGATGTTTCAGCAGAGAATGCTGATGATCTTAGAAAATGGAAGGGCTGGGTTGAGTCCCGCCTCCGCCACTTGACATTGAAGATTGAGCGGCACACATATGGCATGCTTCAGTGCCATCCACATCCTGGTGATTTTTCAGACAAATCTAAGCCTTTCCACTGTTCCTACTTCATGGGTTTGCAACGTAAGCAAGGAGTTCCCGTGAATGAAGGCGAACAATTTGATATAAGACATACCGTTGAAGAATTTAAGCATTCTGTCAACATGTATACTTTGTGGAAACCAGGAATGGCTATCCAGGTATCCCATGTGAAACGGCGTAGCATACCGAACTTTGTTTTTCCTGGTGGCGTTCGACCTTCCCGGCCAACTAAAGCAACTTGGGACAGTAAGCGAAGTTCAGAATTAAGGGATTCCGTACATGGTCAGACAGAGAAGTCTCAAGAAGGACAAGCAGTTGCCTTGAGAGAAGCCGATGAAAGGAAGAGAAAGCGAGCGGAGGACAGCATTGATAACTTAAGAACTTCCAAGTCTTTTGCATCTTTACCTCCCTCCAGCGGGGATGTTCATGATGACTCGAGAAATCCTGTTAGCATTGCTAGTTCTTGTTCTATGAAATGCGATGAATCAGAAGTCAACAGTGTGAATGAGAAGCCTGATTTGAAATCTTTAACGGGAAGTCCTTCCAGGCATGGCGAGACCAATGGATCAGCAAGAAGCATCCAACAAGTCAACCATATGCTTACTGGCATTAATACATGTAATTCTAAAGAAGCAGAAAATCTAGCCATTGAAAAGATCATATCTGGTCCATATGATACACATCAAGCCTTACCAGAAGAACCTGACGAGCTTGAAGATGATGTTGAGTACAGAAATCAATTTAAAAATTTAGGTGGGAACATAAACAAGAGCAACTTGGACTCTTCACATTCAGAGCTGGCAGTGGTAGGCGAACCAGTTATTACTGAGAAGGAAACCTCTTGTTCAAATCATTTACTCCCCAATGAGAGCTTGGAGGAGCTAGAGCCTGCTGAGCTGACAGCTCCATTCATAAGTTCTACAGCTGCACCTCTGCCCCAGAGGAAGCCTCTTATCAGGTTGAACTTCACCTCTCTAGGAAAAGCTGCTGACAAAAGTTCCTAG 2271 0.4368 MGSPGLSNRNNGQQQRLGITEPISLGGPTEYDVIKTRELEKYLQDAGLYENQEEAVSREEVLGRLDQIVKIWVKTISRAKGLNDQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVAPRHVSREEDFFGELHRMLSEMPEVTELHPVPDAHVPVMGFKFNGVSIDLLYARLSLWVIPEDLDISQESILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGNEICEAMEANNANWDALFEPYPFFEAYKNYLQIDVSAENADDLRKWKGWVESRLRHLTLKIERHTYGMLQCHPHPGDFSDKSKPFHCSYFMGLQRKQGVPVNEGEQFDIRHTVEEFKHSVNMYTLWKPGMAIQVSHVKRRSIPNFVFPGGVRPSRPTKATWDSKRSSELRDSVHGQTEKSQEGQAVALREADERKRKRAEDSIDNLRTSKSFASLPPSSGDVHDDSRNPVSIASSCSMKCDESEVNSVNEKPDLKSLTGSPSRHGETNGSARSIQQVNHMLTGINTCNSKEAENLAIEKIISGPYDTHQALPEEPDELEDDVEYRNQFKNLGGNINKSNLDSSHSELAVVGEPVITEKETSCSNHLLPNESLEELEPAELTAPFISSTAAPLPQRKPLIRLNFTSLGKAADKSS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05298 756 MobiDBLite consensus disorder prediction 500 519 - -
Arst3g05298 756 SUPERFAMILY PAP/OAS1 substrate-binding domain 213 362 - -
Arst3g05298 756 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g05298 756 FunFam Putative poly(A) polymerase gamma 179 360 - -
Arst3g05298 756 PANTHER POLY A POLYMERASE 9 542 - -
Arst3g05298 756 Pfam Poly(A) polymerase central domain 18 362 IPR007012 GO:0043631|GO:1990817
Arst3g05298 756 Gene3D Beta Polymerase, domain 2 50 206 IPR043519 -
Arst3g05298 756 FunFam Nuclear poly(A) polymerase 4 364 479 - -
Arst3g05298 756 Pfam Nucleotidyltransferase domain 85 169 IPR002934 GO:0016779
Arst3g05298 756 MobiDBLite consensus disorder prediction 1 24 - -
Arst3g05298 756 SUPERFAMILY Nucleotidyltransferase 18 211 IPR043519 -
Arst3g05298 756 MobiDBLite consensus disorder prediction 566 585 - -
Arst3g05298 756 Gene3D - 18 360 - -
Arst3g05298 756 MobiDBLite consensus disorder prediction 487 612 - -
Arst3g05298 756 CDD NT_PAP_TUTase 58 212 - -
Arst3g05298 756 MobiDBLite consensus disorder prediction 592 612 - -
Arst3g05298 756 MobiDBLite consensus disorder prediction 527 547 - -
Arst3g05298 756 Coils Coil 531 551 - -
Arst3g05298 756 Gene3D Poly(A) polymerase predicted RNA binding domain 364 479 - -
Arst3g05298 756 FunFam Poly(A) polymerase alpha, putative 50 206 - -
Arst3g05298 756 Pfam Poly(A) polymerase predicted RNA binding domain 422 496 IPR007010 GO:0003723|GO:0043631
Arst3g05298 756 Pfam Poly(A) polymerase predicted RNA binding domain 365 423 IPR007010 GO:0003723|GO:0043631
Arst3g05298 756 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 364 490 IPR011068 GO:0003723|GO:0016779|GO:0031123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05298 Arst-Chr3 128078799 128083643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05298 K14376 - qsa:O6P43_005133 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05298 3 128078799 128083643 Arst3g05298 3 128078799 128083643 ECH