Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04945 ATGTTTTTGTATATCTGTACAGGAATGTCTCGTTATCCTCCTCCATATGGAACTATGGTTCGTCCTGTATATCCTCCTCGAGTACCTGGAGCGGTTAATGTTCTCCCGGTATCACGTCCCCCTGTTGCAGGGGTACCTCCAGTTCGCCCTATTATTCCTCCTGTTGTCAGACCTGTGGTTGCTCCTAGTGTTACTCCAGCTGAGAAGCCACAAATCACGGTTTATGTTGGCAAGATTGCACCTACTGTGGAAAATGATTTCATGCTTTCTATTCTTCAGTTATGTGGACCAGTTAGGAGCTGGAAACGTCCTCAGGATTTATCGAATGGAACGCCTAAAAGCTTTGGCTTTTGTGAGTTTGAGACTGATGAAGGGGTTCTTCGTGCCTTGCGTCTTCTTACTAAATTAAATATTGATGGGCAAGAGCTAATGCTGAACATCAATGAAACTACGAAAGAACATCTGAAGCGGTATGTTGCGAAAAAAACTGAAGATTCAAAGAAAAAAGAAACCCAGGTAGCAGGTGCTGAAAAAGATGATGAAGGTGCACAACCTTCTGATGGTGGTGGGAAATCTGATGCCGAGGACTCAAAGAAAGAGGATAGTGATTCACATAACAAGGAATCCCTTGATTTTGCTACCTTCGGCATTGTCACTGATGATGATAGGGAAGCTGATCGAGAGGCTTTGGAAAAGATTACGAACATGATAGAGGAGAGGTTGAAAACAAGACCTTTGCCTCCACCGCCTGCACAGACGCCTGGTGATGGCTCTGCAATAACTTCAGAACAACCAGCTAAAACAAGAGATGGAGATTCTGATGAGGCTATGGGGAGGAATGAAGGAAATGAAGATAAAACTGAAAAAGATGCAAACAGTGACATCAAACAAACTAGTGAACATGATAAGCCTGAGACCCCTGATAGAAGGCATGACAGGAGAAGCAGAGAGAGGGACCGAGATAGGGAACTAAAACGGGAAAAGGACAGGGAGCTTGAAAGATATGAACGAGAAGCAGAGAGGGAACGTATTAGGAAAGAAAGGGAACAAAGAAGGAGGATTGAGGATGCTGAGCGTCAGTATGAATCATGTTTGAAAGAGTGGGAGTATCGAGAAAGGGAGAAAGAGAAAGAGCGCCAGTATGAAAAAGACAAGGAAAAAGAAAGAGAACGCAAACGGAGAAAGGAGATACTATATGAAGAAGAAGATGAGGACGACGATTCAAGGAAGCGGTGGCGTAGAAGTGTATTAGAGGAGAAGAGAAAGAAGAGATTGCGTGAAAAGGAAGACGACTTGGTTGACAGACAAAGAGAAGAGGAAGAAATTGCTGAGGCCAAGAAGAAGGCAGAGGAGGATCAGCAACGGCAACAGCAGAGAGATGCACTGAAACTGTTATCTGACCATTCTATAAATGGCGGTGAAAAAGCCATGGCTACTGAAGAGGCTGCCAATGAAGTAAAAAATGTTGTTACAGAACACAATAATGCAGTTGATTATAATCATGAAGGCCATATAGGTGATGTCAATTCACTAAACGCTATGAATGATGAATCAGCCATGGCATCTGTCTCAGAAAATGATGCACGATCAAGTGCAAATGCTCCTGCAAAGAAGTTGGGATTTGGTCTAGTTGGGTCCGGAAAAAGAACAACTGTCCCTTCTGTTTTCCACGAGGAGGAGGATGATGATGCACACAAGGACAAAAAAATGAGGCCTTTGGTTCCAATTGATTATTCAACTGAGGAACTGCAAGCTGTTCAACCTACTGCCGCTGGGCCAACACCTCCAAATTTGGCTGCTGCTGCAGAATTTGCAAAGCGTATATCCAGTGCTAATCTCAAAGAAGAGAAGCTTGATGGAGAACGAGATAGAAGTAAGCGTTCAAGTGAGAAGTCTAATCACCGAGACAGGGACAGGAGTGATGAAGATGGCACCCACAACAGAGATGACCACAAGGAGAAAACTGACCGTGACAGAGATCGAGATCATGGATTGGACAAAGTAAAGACCTCGGATAACAAGAGACTCTTGGATGCAAAACAGTTAATTGATATGATTCCAAAGACCAAGGAGGAACTGTTCTCGTATGAGATAAACTGGGCAGTGTATGACAAGCATCAGTTGCACGATAGAATGAGACCGTGGATTTCAAAGAAGATCAAAGAGTTTTTGGGGGAAGAAGAAAATACATTGATAGATTACATTGTTTCCAGTACACAAGAGCATGTGAAAGCATCCCAGATGCTAGAACGTCTTCAAATAATTTTAGATGACGAAGCTGAAATGTTTGTTCTCAAGATGTGGAGGATGCTTATCTTTGAAATTAAGAAGGTAGAGACGGGGCTTGCTTTGAGGACGAAATGA 2364 0.4323 MFLYICTGMSRYPPPYGTMVRPVYPPRVPGAVNVLPVSRPPVAGVPPVRPIIPPVVRPVVAPSVTPAEKPQITVYVGKIAPTVENDFMLSILQLCGPVRSWKRPQDLSNGTPKSFGFCEFETDEGVLRALRLLTKLNIDGQELMLNINETTKEHLKRYVAKKTEDSKKKETQVAGAEKDDEGAQPSDGGGKSDAEDSKKEDSDSHNKESLDFATFGIVTDDDREADREALEKITNMIEERLKTRPLPPPPAQTPGDGSAITSEQPAKTRDGDSDEAMGRNEGNEDKTEKDANSDIKQTSEHDKPETPDRRHDRRSRERDRDRELKREKDRELERYEREAERERIRKEREQRRRIEDAERQYESCLKEWEYREREKEKERQYEKDKEKERERKRRKEILYEEEDEDDDSRKRWRRSVLEEKRKKRLREKEDDLVDRQREEEEIAEAKKKAEEDQQRQQQRDALKLLSDHSINGGEKAMATEEAANEVKNVVTEHNNAVDYNHEGHIGDVNSLNAMNDESAMASVSENDARSSANAPAKKLGFGLVGSGKRTTVPSVFHEEEDDDAHKDKKMRPLVPIDYSTEELQAVQPTAAGPTPPNLAAAAEFAKRISSANLKEEKLDGERDRSKRSSEKSNHRDRDRSDEDGTHNRDDHKEKTDRDRDRDHGLDKVKTSDNKRLLDAKQLIDMIPKTKEELFSYEINWAVYDKHQLHDRMRPWISKKIKEFLGEEENTLIDYIVSSTQEHVKASQMLERLQIILDDEAEMFVLKMWRMLIFEIKKVETGLALRTK 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04945 787 Pfam PWI domain 711 774 IPR002483 GO:0006397
Arst3g04945 787 MobiDBLite consensus disorder prediction 425 462 - -
Arst3g04945 787 Gene3D PWI domain 667 783 - -
Arst3g04945 787 MobiDBLite consensus disorder prediction 229 356 - -
Arst3g04945 787 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 7 787 - -
Arst3g04945 787 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 7 787 - -
Arst3g04945 787 FunFam RNA Binding Motif protein homolog 667 783 - -
Arst3g04945 787 Coils Coil 318 367 - -
Arst3g04945 787 ProSiteProfiles PWI domain profile. 691 787 IPR002483 GO:0006397
Arst3g04945 787 MobiDBLite consensus disorder prediction 371 411 - -
Arst3g04945 787 MobiDBLite consensus disorder prediction 267 356 - -
Arst3g04945 787 Coils Coil 428 459 - -
Arst3g04945 787 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 72 150 IPR000504 GO:0003723
Arst3g04945 787 SMART pwi_2 704 777 IPR002483 GO:0006397
Arst3g04945 787 MobiDBLite consensus disorder prediction 161 210 - -
Arst3g04945 787 Gene3D - 66 181 IPR012677 -
Arst3g04945 787 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 143 IPR000504 GO:0003723
Arst3g04945 787 SUPERFAMILY PWI domain 709 775 IPR036483 GO:0006397
Arst3g04945 787 MobiDBLite consensus disorder prediction 612 667 - -
Arst3g04945 787 CDD RRM_RBM25 73 155 IPR034268 -
Arst3g04945 787 SUPERFAMILY RNA-binding domain, RBD 46 152 IPR035979 GO:0003676
Arst3g04945 787 SMART rrm1_1 73 146 IPR000504 GO:0003723
Arst3g04945 787 MobiDBLite consensus disorder prediction 161 208 - -
Arst3g04945 787 Coils Coil 371 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04945 Arst-Chr3 125146370 125151650 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04945 K12822 - gmx:100809428 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04945 3 125146370 125151650 Arst3g04945 3 125146370 125151650 ECH