Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04273 ATGTCTATCACACAAAGCCTCTCCACTCCGCTCTCTTCTTCTTCCTCAACTTTCCTTGCTCCCTCCACCTTCAATCCCAGGAGTCAGGTGACGTTGCCCGTGAAGAGCTTGGGCGTTTGCAAATGCATTGCGGCACCACAAGAAGCTGATACCGCCTACAAGACGAAGGTCTCTCGCAATGGAAATATTGCTAAACTTCAAGCCGGGTATCTCTTTCCGGAGATTGCTAGAAGAAGGAATGCACACTTGCTTAAGTACCCTGATGCCAAAGTAATAAGCCTTGGAATTGGTGATACTACTGAACCCATTCCTGATGCCATAACTTCTGCAATGTCAAAGAGATCACATGCATTATCAACCGTAGAAGGATATAGTGGTTATGGAGCTGAACAAGGTGAAAGGCCATTAAGAAGTGCAATTGCTTCAACATTTTACCGTGATCTTGGCATTGAAGATGATGATATATTTGTGTCAGATGGAGCAAAGTGTGATATATCTCGCCTTCAGATTGTCTTTGGGTCAAAAATTAAAATGGCTGTGCAAGACCCATCATACCCGGCCTATGTAGACTCGAGTGTAATTATGGGCCAGACTGGCTACTACCAGAAGGATGTTGAGAAGTTTGCAAACATCGAATACATGCGATGTAACCCAGAAAATGGTTTTTTCCCTGATTTGTCTTCTATTTCTCGACCAGATATAATCTTTTTCTGCTCACCAAACAACCCTACTGGTGCTGCGGCAACAAGAGAGCAATTGACCCAACTTGTTAAGTTTGCTAAGGACAATGGGTCTATAATAATCTTTGATTCAGCATATGCAATGTACATCTCTGGTGACAATCCGCGCTCGATCTTTGAAATTCCCGGAGCCAAAGAGGTTGCCCTTGAGGTTTCATCATTTAGCAAGTATGCCGGGTTCACTGGAGTTCGACTGGGTTGGACTGTGATTCCGAAGCAGTTGTTGTTTTCTGATGGATTTCCTGTTGCCAAGGACTTCAATCGTATTGTATGTACTTGCTTCAATGGTGCATCAAATATTTCCCAGGCTGGTGGTCTGGCTTGCCTTTCACCAGATGGCCTTAAGGCTATGCAAGACGTTATTGGATTCTACAAAGAGAACACTAACATAATAGTTGAAACATTCGATTCGCTTGGATTTAAAGTATATGGGGGGAAAGATGCCCCGTATGTGTGGGTTCATTTTCCCGGCAGAAACTCATGGGATGTATTCGCCGAGATTCTTGAGAAGACTCATGTTGTTACAACTCCTGGAAGTGGTTTTGGACCTGGTGGCGAAGGTTTTGTCAGGGTTAGTGCTTTTGGTCACAGGGAAAATGTTTTGGAGGCATGTAGAAGATTCAAGGAGCTATACAAATGA 1380 0.4384 MSITQSLSTPLSSSSSTFLAPSTFNPRSQVTLPVKSLGVCKCIAAPQEADTAYKTKVSRNGNIAKLQAGYLFPEIARRRNAHLLKYPDAKVISLGIGDTTEPIPDAITSAMSKRSHALSTVEGYSGYGAEQGERPLRSAIASTFYRDLGIEDDDIFVSDGAKCDISRLQIVFGSKIKMAVQDPSYPAYVDSSVIMGQTGYYQKDVEKFANIEYMRCNPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQLTQLVKFAKDNGSIIIFDSAYAMYISGDNPRSIFEIPGAKEVALEVSSFSKYAGFTGVRLGWTVIPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPDGLKAMQDVIGFYKENTNIIVETFDSLGFKVYGGKDAPYVWVHFPGRNSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVLEACRRFKELYK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04273 459 NCBIfam LL-diaminopimelate aminotransferase 58 456 IPR019942 GO:0008483
Arst3g04273 459 CDD AAT_like 92 456 - -
Arst3g04273 459 Pfam Aminotransferase class I and II 90 454 IPR004839 GO:0009058|GO:0030170
Arst3g04273 459 FunFam LL-diaminopimelate aminotransferase, chloroplastic 344 455 - -
Arst3g04273 459 Hamap LL-diaminopimelate aminotransferase [dapL]. 58 457 IPR019942 GO:0008483
Arst3g04273 459 FunFam LL-diaminopimelate aminotransferase, chloroplastic 101 358 - -
Arst3g04273 459 Gene3D - 101 358 IPR015421 GO:0003824
Arst3g04273 459 PANTHER AMINOTRANSFERASE 6 459 IPR019942 GO:0008483
Arst3g04273 459 SUPERFAMILY PLP-dependent transferases 59 455 IPR015424 -
Arst3g04273 459 Gene3D Aspartate Aminotransferase, domain 1 71 455 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04273 Arst-Chr3 118021108 118026159 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04273 K10206 - gmx:100801405 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04273 3 118021108 118026159 Arst3g04273 3 118021108 118026159 ECH