Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04267 ATGGCGTCGTCGGAGATCGAGGTGGTAACATCGTCGGACTCCAAACCCAACGAAACTTACCAGCAGCCTCCCATTACCGACGTCTACACTGCCTCCACCTACGGTGACTTACAAAAATTGAGGAATTTCGTCGAACATGACGGTGCCTCCGTTACCGTTCCCGATGGGAATGGCTATTACGCTCTTCAATGGGCTTGCCTTAACAACTTCCATGAAATTGCCCACTATCTCATTCAGCACGGGGCTGATGTCAATGCTGCTGACCACAATCAACAAACGGCATTGCATTGGGCGGCAGTTTGGGGTTCCATTCCATCTGCCGATGTGCTCTTGGAGAATGGAGCTCGGGTTGAAGCCACAGACATAAATGGATATCGGGTAGCTCATGTTGCAGCACAATATGGGCAAACAGCTTTCTTAAACCACATTGTTGTAAAGTACCATGCTGATTTTGACGTGCCTGATAATGATGGAAGGAGTCCTCTTCATTGGGCTGCATATAAGGGATTTGTTGATACAGTAAGATTGCTTCTCTTTAGAGATGCTAGTCAAAGGAGACAAGATAAAGATGGTTGCACTCCGTTGCACTGGGCTGCATTAAGAGGATACGCGGAGGTGTGTGCTGTGCTTGTTCATGCAGGCACCAAAGAAGAACTAACAGTGAAGGACAATGCTGGAAGCACTCCAGTGCAGCTTGCACATGATAAAGGTCATCGGCATGTCGCTCTTTTCCTTTCTAATCAACTACGGGCACATAGCAACCAAGACAAAATTTGCGGGGGGAAGTTGACAGAAGTTGGTTATGCTCCCTTGTTATTGTTTGTTATAGTCTTTTGTATGATTCTCTTCATCAACTCGGTTGTTACAGCTCCTGGTCTTAAAAAGATTACTGCTGTTGTTGGACTTTGGGCGTGGACAGCTCTTTCTCTGGCAGTTGGTTCCCTGATTATGTTTTATAGGTGTAGTAGTAAGGATCCTGGTTACATCAAACGGGTGGGAGACTTGGGTGGTAATGCAGAGGATCCATTGCTGAATATTGATCTGAATAGTTCCTCTATTTGGGCAGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGGCCTATCCGATCCAAGCATTGCCCTACATGTAAGCGTTGTGTGGAACAGTTTGATCATCATTGTCCATGGATATCTAATTGTGTGGGAAAGAGTAATAAGAGGGATTTCTTTATTTTCATCTGCATGGGAACGTTGACTTCTTTACTTTCTGGTGCCATTGCAATTCAGAGAATTTGGACATCTATACCAGCATTTTCAGCAGACGAAACATGGATGCATCATGTGTTAGTTAACCATCCAGGCGTCATCGTATTTTTGGTGATTGATGTTGTTATTTTACTTGCCGCTACAAGTTTGACGATAACACAGGCTTCCATGATAGCCCGAAATGTGACGACAAATGAAATAGCAAATTCGAAGCGTTATGAGTATCTTCGCGGTCCTGATGGACGGTTCAGAAACCCATATAACCACGGCTGTTGGAAGAATTGTGTCGACTTTGTTTTTGTAGGCCACACAAATGACGATGATATTGCTTGGCGTCCGTTACAGCAGATTGCTGCTCCTTAG 1617 0.4484 MASSEIEVVTSSDSKPNETYQQPPITDVYTASTYGDLQKLRNFVEHDGASVTVPDGNGYYALQWACLNNFHEIAHYLIQHGADVNAADHNQQTALHWAAVWGSIPSADVLLENGARVEATDINGYRVAHVAAQYGQTAFLNHIVVKYHADFDVPDNDGRSPLHWAAYKGFVDTVRLLLFRDASQRRQDKDGCTPLHWAALRGYAEVCAVLVHAGTKEELTVKDNAGSTPVQLAHDKGHRHVALFLSNQLRAHSNQDKICGGKLTEVGYAPLLLFVIVFCMILFINSVVTAPGLKKITAVVGLWAWTALSLAVGSLIMFYRCSSKDPGYIKRVGDLGGNAEDPLLNIDLNSSSIWAGNWSQLCPTCKIIRPIRSKHCPTCKRCVEQFDHHCPWISNCVGKSNKRDFFIFICMGTLTSLLSGAIAIQRIWTSIPAFSADETWMHHVLVNHPGVIVFLVIDVVILLAATSLTITQASMIARNVTTNEIANSKRYEYLRGPDGRFRNPYNHGCWKNCVDFVFVGHTNDDDIAWRPLQQIAAP 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04267 538 SMART ANK_2a 123 153 IPR002110 GO:0005515
Arst3g04267 538 SMART ANK_2a 57 86 IPR002110 GO:0005515
Arst3g04267 538 SMART ANK_2a 90 119 IPR002110 GO:0005515
Arst3g04267 538 SMART ANK_2a 157 186 IPR002110 GO:0005515
Arst3g04267 538 SMART ANK_2a 190 221 IPR002110 GO:0005515
Arst3g04267 538 FunFam S-acyltransferase 144 252 - -
Arst3g04267 538 ProSiteProfiles Ankyrin repeat profile. 190 222 IPR002110 GO:0005515
Arst3g04267 538 ProSiteProfiles Ankyrin repeat region circular profile. 190 214 - -
Arst3g04267 538 ProSiteProfiles Ankyrin repeat region circular profile. 90 121 - -
Arst3g04267 538 MobiDBLite consensus disorder prediction 1 22 - -
Arst3g04267 538 ProSiteProfiles Ankyrin repeat region circular profile. 57 88 - -
Arst3g04267 538 Gene3D - 2 144 IPR036770 -
Arst3g04267 538 ProSiteProfiles Ankyrin repeat profile. 90 122 IPR002110 GO:0005515
Arst3g04267 538 ProSiteProfiles Ankyrin repeat profile. 57 89 IPR002110 GO:0005515
Arst3g04267 538 Gene3D - 145 251 IPR036770 -
Arst3g04267 538 ProSiteProfiles Ankyrin repeat region circular profile. 157 183 - -
Arst3g04267 538 FunFam S-acyltransferase 11 143 - -
Arst3g04267 538 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 19 518 - -
Arst3g04267 538 ProSiteProfiles Ankyrin repeat profile. 157 189 IPR002110 GO:0005515
Arst3g04267 538 Pfam DHHC palmitoyltransferase 360 488 IPR001594 GO:0016409
Arst3g04267 538 Pfam Ankyrin repeats (3 copies) 41 121 IPR002110 GO:0005515
Arst3g04267 538 Pfam Ankyrin repeats (3 copies) 129 215 IPR002110 GO:0005515
Arst3g04267 538 ProSiteProfiles DHHC domain profile. 360 410 - -
Arst3g04267 538 SUPERFAMILY Ankyrin repeat 22 246 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04267 Arst-Chr3 117975315 117983052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04267 26 248 Miscellaneous Gene Families AT5G60070 26.201 6.75e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04267 K20032 - gmx:100807263 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04267 3 117975315 117983052 Arst3g04267 3 117975315 117983052 ECH