Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04203 ATGGCTTCTTCTATTTCTTCTTCTATCAATATCTCTTCATATTCCTCCACACCACCACTTTTCCACCCAAGTGCTTCTGCATCCCAACGCTTCAAATTGTTCAAGGGATTACGCCGTACAAATGGATATGCATTAGATTTCGTGTTTCTCCGACTCTCCTCTAAATTCCCCTCTACTCACTCTGCTATTTCTAGAATTGAAGCTGCAGGGGGAGAACTGCATTCTAATCGGCTAGGCTCTGATGCTGCCACAAAGGTTGAATCAGTTGCGAGAATCAATCGGTTTTCTGATGAAGACGATGAATTTGATCTTGACACTCCCACGCAAGGTTTTGCTTCCATCCCGGAGGCCATTCAAGACATTCGAAACGGAAAGATGGTAGTTGTTGTAGATGACGAAGACAGAGAAAATGAAGGAGATTTAATCATGGCAGCAGAGTTAGTAACACCTGAGGCCATGGCATTTATTGTTAAGCATGGAACCGGCATAGTCTGCATTAGTATGAAAGAGGAAGATCTCGAGAGACTGGAACTTCCACTCATGGTAAACAGCAAGGACAATGATGAAAAATTGCGCACAGCGTTCACTGTGACAGTGGATGCTAAACATGGTACCACAACAGGGGTGTCAGCTCGCGATCGAGCAACAACAGTCTTGGCCCTTTCATCTAGTGATTCTAAACCAACTGATTTCAATCGTCCAGGCCATATTTTTCCACTAAAATACAGGGAAGGTGGTGTGTTGAAGAGAGCAGGACACACAGAAGCTTCAGTTGATCTTGCCATGCTGGCTGGTTTGAATCCAATAGCAGTACTATGTGAAATTGTTGACGAGGATGGTTCCATGGCACGATTGCCTAAGCTTCGCCAGTTTGCAGAACGCACAAATTTGAAAATTGTATCTATTGCTGACTTGATTAGATACAGAAGGAAGAGAGATAAATTAGTAGAACATGCTGGTGCTGCTGTTATACCAACAATGTGGGGACCATTTAATGCTTGCTGTTATAGACCACTTATAGATGGCGTGGAGCATATTGCAATGGTTAAGGGTGACATTGGAGATGGACAAGATGTTCTCGTGAGAGTACATTCAGAGTGTCTTACGGGAGATATATTTGGATCTGCAAGATGTGACTGTGGGAGCCAGCTTGCTATTGCAATGCAGCAGATTGAGGCTGCTGGTAGAGGTGTATTGGTGTATCTTCGTGGACACGAGGGAAGGGGGATTGGATTGGGTCATAAGCTTCGCGCTTATAACCTGCAAGATGATGGACGGGACACAGTAGAAGCCAACGAAGAGTTGGGATTGCCTGTTGACTCAAGAGAGTATGGAATTGGTGCACAGATACTGAGGGACTTGGGTGTTCGTTCAATGAAGCTGATGACAAACAACCCAGCAAAATATGTTGGGCTCAAAGGTTATGGTTTGACAATTTCTGGAAGGATTCCTTTAGTAGCACTTATTACAAAGGAAAACAGGAGATATTTGGAGACAAAGCGTGTAAAAATGGGTCATGTTTATGGACTAAAATCCAACAGCGAACTGAATCCAGACAGGGGCAATGGTAAACCTGGTGTTGATGATTCTAAGGGTGCTACTAGCCAATAG 1611 0.4395 MASSISSSINISSYSSTPPLFHPSASASQRFKLFKGLRRTNGYALDFVFLRLSSKFPSTHSAISRIEAAGGELHSNRLGSDAATKVESVARINRFSDEDDEFDLDTPTQGFASIPEAIQDIRNGKMVVVVDDEDRENEGDLIMAAELVTPEAMAFIVKHGTGIVCISMKEEDLERLELPLMVNSKDNDEKLRTAFTVTVDAKHGTTTGVSARDRATTVLALSSSDSKPTDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLNPIAVLCEIVDEDGSMARLPKLRQFAERTNLKIVSIADLIRYRRKRDKLVEHAGAAVIPTMWGPFNACCYRPLIDGVEHIAMVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGSQLAIAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLTISGRIPLVALITKENRRYLETKRVKMGHVYGLKSNSELNPDRGNGKPGVDDSKGATSQ 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04203 536 FunFam Riboflavin biosynthesis protein RibBA 316 487 - -
Arst3g04203 536 NCBIfam GTP cyclohydrolase II 321 507 IPR000926 GO:0003935|GO:0009231
Arst3g04203 536 MobiDBLite consensus disorder prediction 509 536 - -
Arst3g04203 536 Hamap GTP cyclohydrolase-2 [ribA]. 314 510 IPR000926 GO:0003935|GO:0009231
Arst3g04203 536 PANTHER GTP CYCLOHYDROLASE II-RELATED 110 509 - -
Arst3g04203 536 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 109 313 IPR000422 GO:0008686|GO:0009231
Arst3g04203 536 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 102 315 - -
Arst3g04203 536 SUPERFAMILY RibA-like 314 485 IPR036144 -
Arst3g04203 536 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 112 309 IPR000422 GO:0008686|GO:0009231
Arst3g04203 536 Gene3D GTP cyclohydrolase II 316 487 IPR036144 -
Arst3g04203 536 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 116 308 IPR000422 GO:0008686|GO:0009231
Arst3g04203 536 Gene3D DHBP synthase 100 315 - -
Arst3g04203 536 CDD GTP_cyclohydro2 315 506 IPR000926 GO:0003935|GO:0009231
Arst3g04203 536 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 110 506 IPR016299 GO:0009231
Arst3g04203 536 SUPERFAMILY YrdC/RibB 109 312 IPR017945 -
Arst3g04203 536 Pfam GTP cyclohydrolase II 321 484 IPR032677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04203 Arst-Chr3 117365269 117369355 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04203 K14652 - gmx:100791686 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04203 3 117365269 117369355 Arst3g04203 3 117365269 117369355 ECH
Arst3g04203 3 117365269 117369355 Arst10g00653 10 5483458 5487054 PCT