Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04166 ATGGAGAAGAAGCAGAGTAGTGCAGCGGCCATGGGGGTTGATGACTCCTTGAACCCACGAGTCGACGCCGTGAAGCCTTCAAGGACTGTGGCCATAAGCGACCAAGCAAACGCACTGGTTCAAGCTGGCGTCCCCGTTATTCGCCTGGCCGCCGGGGAGCCCGATTTCGACACTCCCGCTTCCATGTTTCCAATTCTGTGCTGACTCCTCACTCTTAATGGTTATGGTTATGGATAGGCTGGGATTAATGCAATTCGTGAAGGCCATACAAGGTACACCCCGAATGCCGGAACATTACAATTACGCCAGGCTATTTCTCATAAGCTCAAAGAGGAGAACGGGATCACTTACGCCCCTGATCATATTGTGCTTAGTAATGGAGCCAAGCAGAGTCTTGCCCAGGCCGTTCTTGCAGTTTGCTCCCCGGGAGACGAGGTCATTATTCCTGCTCCATATTGGGTGAGTTACCCAGAAATGGCAAGATTGGCTGATGCTGTACCTGTTATTCTTCCAACATCAATAGATAATCATTTCCTTTTGGACCCCAAACTCCTTCAATCCAAAATTACTCAAAGATCAAGGCTTCTCATTCTTTGCTCGCCATCTAACCCAACAGGATCTGTCTACCCCAAGAAATTACTTCAAGACATAGCCCACATTGTAGCAAACCACCCCAGGCTTCTGATTCTCTCTGATGAGATTTACGAGCATATAATTTATGCACCAGCAACTCATACAAGCTTTGCATCACTACCAGGAATGTGGGACAGAACCTTAACTGTGAACGGATTTTCCAAGGCCTTTGCAATGACTGGATGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATTCAAAGTCAGTTCACTACAGGGCCCAATAGCATAGCTCAGAAAGCTGGAGTTGCAGCGTTAGGACTAGGCTATGCTGGTGGGGAAATTGTAGCTAATATGGTGAAAGCATTTCGGGAGCGCCGAGATTTCTTGGTTAAAAGTTTTAGGGAAATGGAGGGTCTTAAAATATCAGAACCCCAGGGGGCATTTTATCTATTCATTGATTTCAGCTACTACTATGGAAGAGAAGCTGAAGGATTTGGTAGAATTGATGATTCGGAGTCCCTTTGTCGATATCTTTTGGATAAGGGCCAGGTGGCCTTGGTGCCTGGGAGTGCATTTGGAGATGATACTTGTGTTCGGATATCATATGCAGAATCCCTTACTATCCTTCAAGAAGCTGTGGAGAGAATTAAGAAAGCACTCGCCCCTCTCAGCTCTGCTGCACTCCGTTAA 1308 0.4679 MEKKQSSAAAMGVDDSLNPRVDAVKPSRTVAISDQANALVQAGVPVIRLAAGEPDFDTPASMFPILCXLLTLNGYGYGXAGINAIREGHTRYTPNAGTLQLRQAISHKLKEENGITYAPDHIVLSNGAKQSLAQAVLAVCSPGDEVIIPAPYWVSYPEMARLADAVPVILPTSIDNHFLLDPKLLQSKITQRSRLLILCSPSNPTGSVYPKKLLQDIAHIVANHPRLLILSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACGKIQSQFTTGPNSIAQKAGVAALGLGYAGGEIVANMVKAFRERRDFLVKSFREMEGLKISEPQGAFYLFIDFSYYYGREAEGFGRIDDSESLCRYLLDKGQVALVPGSAFGDDTCVRISYAESLTILQEAVERIKKALAPLSSAALR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04166 435 Gene3D - 91 313 IPR015421 GO:0003824
Arst3g04166 435 CDD AAT_like 47 424 - -
Arst3g04166 435 Gene3D Aspartate Aminotransferase, domain 1 30 420 IPR015422 GO:0003824
Arst3g04166 435 FunFam Aspartate aminotransferase 91 313 - -
Arst3g04166 435 Pfam Aminotransferase class I and II 46 422 IPR004839 GO:0009058|GO:0030170
Arst3g04166 435 SUPERFAMILY PLP-dependent transferases 17 426 IPR015424 -
Arst3g04166 435 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 263 276 IPR004838 GO:0003824|GO:0009058|GO:0030170
Arst3g04166 435 PANTHER ASPARTATE AMINOTRANSFERASE 15 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04166 Arst-Chr3 116215512 116218903 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04166 K15849 - gmx:100776446 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04166 3 116215512 116218903 Arst3g04166 3 116215512 116218903 ECH
Arst3g04166 3 116215512 116218903 Arst10g01191 10 14835060 14838694 PCT