Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03991 GATTATCTGTTCAAATTGTTGATGATTGGGGACTCTGGTGTTGGCAAGAGCAGCCTACTCCTCAGTTTCACCTCCGATGATTTTCAAGATCTCTCCCCCACCATTGGTGTTGATTTTAAGATCAAATATGTTACTATCGGTGGTAAACAGCTCAAGCTTGCCATTTGGGATACTGCTGGTCAAGAGAGATTCAGAACGCTCACAAGTTCTTACTACCGAGGGGCACAAGGGATCATTATGGTTTATGATGTAACGCGACGGGAAACATTTACAAATCTTTCTGACATATGGGCAAAGGAAATTGACCTCTATTCAACAAATCAAGACTGCATCAAGATGCTTGTTGGAAACAAAGTAGACAAGGAGAGTGAAAGAGTTGTGACAAAGAAAGAGGGAATAGAATTTGCCAGGGAATATGGTTGCCTGTTTACTGAATGCAGTGCTAAAACTCGGGTCAATGTACAACAATGCTTTGAAGAGCTTGTTTTGAAGATTTTGGATACACCTAGCCTCTTAGCCGAGGGTTCTAAAGGGGTCAAGAAGAACATTTTCAAGGAGAGGCCACCCGAAACTGATACATCCACGAGTAGCTGTTGCTGA 600 0.425 MDSSLGQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDDFQDLSPTIGVDFKIKYVTIGGKQLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVTKKEGIEFAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGVKKNIFKERPPETDTSTSSCC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03991 209 Coils Coil 209 209 - -
Arst3g03991 209 SMART arf_sub_2 1 179 - -
Arst3g03991 209 ProSiteProfiles small GTPase Rab1 family profile. 9 209 - -
Arst3g03991 209 Gene3D - 7 209 IPR027417 -
Arst3g03991 209 ProSiteProfiles small GTPase Rho family profile. 7 176 - -
Arst3g03991 209 SMART ras_sub_4 11 178 - -
Arst3g03991 209 PRINTS Transforming protein P21 ras signature 153 175 - -
Arst3g03991 209 PRINTS Transforming protein P21 ras signature 14 35 - -
Arst3g03991 209 PRINTS Transforming protein P21 ras signature 36 52 - -
Arst3g03991 209 PRINTS Transforming protein P21 ras signature 118 131 - -
Arst3g03991 209 PRINTS Transforming protein P21 ras signature 54 76 - -
Arst3g03991 209 SMART ran_sub_2 19 205 - -
Arst3g03991 209 FunFam Ras-related protein RABC1 7 209 - -
Arst3g03991 209 Pfam Ras family 15 176 IPR001806 GO:0003924|GO:0005525
Arst3g03991 209 PANTHER RAS-RELATED PROTEIN RAB 13 184 - -
Arst3g03991 209 SMART rab_sub_5 14 178 - -
Arst3g03991 209 SMART rho_sub_3 16 178 IPR001806 GO:0003924|GO:0005525
Arst3g03991 209 ProSiteProfiles small GTPase Ras family profile. 6 209 IPR001806 GO:0003924|GO:0005525
Arst3g03991 209 NCBIfam small GTP-binding protein domain 12 170 IPR005225 GO:0005525
Arst3g03991 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 183 IPR027417 -
Arst3g03991 209 CDD Rab18 14 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03991 Arst-Chr3 112394973 112397022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03991 15 168 EF-hand Containing Proteins AT5G27540 24.375 3.81e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03991 K07910 - gmx:100787603 379.022