Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03986 ATGTCCATAAGCATCCACAATCTTCCTCGCTCTTCTGGTATTCTGAGAATCAGAGTTTCTGGAAATAGATTATTCCGCAAGAATGGAAATAAGTGTTCGGGAGCGGGATCTATATCGTGTTCGGCTGGCGCTAGGAATGATGATTTTCTTCCTTCCATTAATCAATTAAGCGATGCACGCCTCATTTATTCTGTTGCTTCATCCATGGGCCATAACCAGGAGTCTCATCCAGAATCACATTTTAGAGTTCCTGCAATTGTCGATGCCCTACAAGAAATGCACCTCACTTCAAAGTTTCGTGGCTCTGAGGTAATTGAACTTCAAAATTTCGAGCCAGCTTCAGTAGATGACATTGCAAGTGTGCATGCAAGAGCTTATGTTTCTGGCCTTGAGAAGGCTATGGATCAAGCATCCGAGAAGGGTCTAATTTTCATTGATAGTTCTGGACCAACCTATGCTACTGCTACTACCTACCGGGAGTCAATTGTTGCTGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCTTCAAAGATAAGTAGAGATCCACCTACTGGTTTTGCTTTGATAAGACCACCGGGACACCATGCTGTTCCACAAGGACCAATGGGCTTCTGTGTTTTTGGAAATGTGGCCATTGCAGCTCGTTATGCTCAGCGTGTTCATGGACTAAAGCACGTCTTCATAATTGACTTTGATGTTCACCATGGAAATGGAACAAATGATGCTTTCTATGATGATCCAGATATATTTTTCCTTTCAATTCATCAAGATGGAAGCTACCCAGGTACTGGTAAATTTGACGAAGTTGGCAGCGGAGCTGGTGAAGGAACCACTCTAAATTTGCCTCTTCCTGGAGGATCAGGTGATACTACTATGAGAACAGTGTTTGATGAAGTCATTGTACCTTGTGCTCAAAGATTTAAGCCAGATATAATCCTTGTTTCTGCTGGATATGACGGGCACGTATTGGATCCACTAGCCAACCTTCAATACACAACTGGAACATATTACACGCTTGCTTCCAACATTAAACAACTATCAAAAGAGTTATGTGGAGGCAGATGCGTGTTCTTCTTAGAAGGAGGATACAACCTAAAGTCTCTTTCATACTCAGTGGCAGACACATTCCGTGCTCTTCTCGGTGACCCAAGCTTGGCATCTGAGTTTGATGACCCCAATATTTTATATGAAGAGCCATCAACAAAGGTTAAGCAAGCTATTCAGAGGATTAAATCCATTCATTCCCTGTGA 1260 0.4286 MSISIHNLPRSSGILRIRVSGNRLFRKNGNKCSGAGSISCSAGARNDDFLPSINQLSDARLIYSVASSMGHNQESHPESHFRVPAIVDALQEMHLTSKFRGSEVIELQNFEPASVDDIASVHARAYVSGLEKAMDQASEKGLIFIDSSGPTYATATTYRESIVAAGAGLALVDSVVAASKISRDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKHVFIIDFDVHHGNGTNDAFYDDPDIFFLSIHQDGSYPGTGKFDEVGSGAGEGTTLNLPLPGGSGDTTMRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYTLASNIKQLSKELCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDPSLASEFDDPNILYEEPSTKVKQAIQRIKSIHSL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03986 419 Gene3D Histone deacetylase domain 51 418 IPR037138 -
Arst3g03986 419 SUPERFAMILY Arginase/deacetylase 71 387 IPR023696 -
Arst3g03986 419 PANTHER HISTONE DEACETYLASE 9-RELATED 71 418 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Arst3g03986 419 PRINTS Histone deacetylase superfamily signature 194 217 IPR000286 -
Arst3g03986 419 PRINTS Histone deacetylase superfamily signature 312 322 IPR000286 -
Arst3g03986 419 PRINTS Histone deacetylase superfamily signature 228 243 IPR000286 -
Arst3g03986 419 CDD HDAC_classII 76 383 - -
Arst3g03986 419 Pfam Histone deacetylase domain 76 381 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03986 Arst-Chr3 112300517 112304607 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03986 - - gmx:100788664 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03986 3 112300517 112304607 Arst3g03986 3 112300517 112304607 ECH