Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03974 ATGGGAAATTCAGGGTCAACAGATGATTCTAGTGATGATTTCGTTCATCACCCTTCTTCTTATGATGGGATTTCGGGGACTACTAGCTATGATTATCATCAACCCTCTTCTTATGATGGGACTTCAAGGAATACTAGCTATGATTATTATCCCCAACCATCTTCTTATGATGCAACTTCAAAGAACACAAGCTATGAGGATTATCCCCAACCATCTTCTTATGATGCAACTTCAAAGAACAATAGCTATGAGGATTATCGCCAACCTTCTTCTTATGCTGGGAGTTCGAAGAATACTAAATACCAGCAAATCGAGCGCCCCACTTATATAGCTGATAATTTCAGTTCACTTGATCAGGTTATTACTGCTCTTAGAGAAGCTGGTCTGGAATCATCAAATTTAATACTTGGTATTGATTTCACCAAAAGCAACGAATGGACAGGCAAGCACTCATTCAACCACAAAAGCCTTCATCATATTGGCCGGATTCCGAATCCATACGAGCAGGCAATCTCCATCATCGGCCGTACTCTCGCTGCTTTTGACGAGGATAATCTGATTCCATGTTTTGGATTTGGTGATGCATCTACGCATGATAAGTATGTGTTCAACTTTTATCCTGATGGTCGCTCTTGTCGTGGTTTTGAGGAAGTACTTGCACGCTACAGAGAGATTGTTCCACTCTTAAAATTGGCAGGTCCAACATCATTTGCACCTGTAGTTGATGCAGCAATTGATATTGTGGAGAGAAGCCAGGGTCAATATCATGTTCTTGTAATTATTGCTGATGGACAGGTTACTAGAAGTTCAGATACACCACATGGAAAGCTTAGTCCACAAGAGCAAGCAACCATTGATTCTATTGTTGCTGCAAGTCACTATCCACTCTCAATTATTTTGGTTGGAGTTGGAGATGGACCATGGGATGAAATGCAACGCTTCGATGATAACATTAAGCACCGGTTATTTGACAACTTTCAGTTTGTGAACTTCACAAAGATCATGTCCGAAAAAGAGGCATCAAAGAAGGAAGCAGCATTTGCACTTGCTGCCCTTATGGAAATTCCAATTCAGTACCGGATAGCCTTAAATTTACAACTTGGAAGTGGAAAATCAATAGGTAACCATCGAAGTAACAGGCCTCTGCCTCCGCCTAAGGAAGTTATAGACCATGACAATTCTGTCACCACAGTTCCACGAAATGTTGAATCGGTCGAGCCATCGGCTCCGGCTGTAACTGAATCAGTATGCCCTATTTGCCTAACGAATCCAAAGGACATGGCGTTTGGATGTGGCCATACAACTTGCAGGGAGTGTGGTGCAACATTATCTTCATGTCCTATGTGCCGGCAGGAAATTACAACTCGCCTGAAATTGTACAATTGA 1386 0.4192 MGNSGSTDDSSDDFVHHPSSYDGISGTTSYDYHQPSSYDGTSRNTSYDYYPQPSSYDATSKNTSYEDYPQPSSYDATSKNNSYEDYRQPSSYAGSSKNTKYQQIERPTYIADNFSSLDQVITALREAGLESSNLILGIDFTKSNEWTGKHSFNHKSLHHIGRIPNPYEQAISIIGRTLAAFDEDNLIPCFGFGDASTHDKYVFNFYPDGRSCRGFEEVLARYREIVPLLKLAGPTSFAPVVDAAIDIVERSQGQYHVLVIIADGQVTRSSDTPHGKLSPQEQATIDSIVAASHYPLSIILVGVGDGPWDEMQRFDDNIKHRLFDNFQFVNFTKIMSEKEASKKEAAFALAALMEIPIQYRIALNLQLGSGKSIGNHRSNRPLPPPKEVIDHDNSVTTVPRNVESVEPSAPAVTESVCPICLTNPKDMAFGCGHTTCRECGATLSSCPMCRQEITTRLKLYN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03974 461 ProSiteProfiles Zinc finger RING-type profile. 417 450 IPR001841 -
Arst3g03974 461 CDD vWA_copine_like 110 359 IPR010734 -
Arst3g03974 461 SMART VWA_4 131 334 IPR002035 -
Arst3g03974 461 Pfam Copine 156 365 IPR010734 -
Arst3g03974 461 MobiDBLite consensus disorder prediction 21 99 - -
Arst3g03974 461 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 392 461 IPR013083 -
Arst3g03974 461 SMART ring_2 417 449 IPR001841 -
Arst3g03974 461 Pfam Zinc finger, C3HC4 type (RING finger) 414 455 - -
Arst3g03974 461 SUPERFAMILY vWA-like 132 315 IPR036465 -
Arst3g03974 461 SUPERFAMILY RING/U-box 412 456 - -
Arst3g03974 461 PANTHER COPINE FAMILY PROTEIN 1 75 444 - -
Arst3g03974 461 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03974 Arst-Chr3 111983347 111986695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03974 K16280 - gmx:100791316 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03974 3 111983347 111986695 Arst3g03974 3 111983347 111986695 ECH