Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03882 ATGGCATCAACAGCGACTGGGTGGTACAGAGGAAGGGTCAAAGCTGTTCCTTCTGGGGATTGTTTGGTCATTGTGGCCCTCACTAGCTCAAGGCCTGGTGCTCTTCCTGAAAAGACCATCACTTTATCATCTTTAATTGCTCCTAGGCTGGCAAGAAGGGGTGGTGTGGATGAACCATATGCTTGGGAAAGTAGAGAATTTCTAAGGAAGCTCTGCGTTGGGAAGGAGGTGACCTTCAAGATTGATTACAATGTGCCCTCCATAAATCGTGAGTTTGCAAGTGTTTTTCTTGGGGACAAGAATGTTGCAATGCTGGTTGTTGCTGCAGGATGGGCAAAGATTAGAGAGCAGGGGCAACAGAAAGGAGAAGCAAGCCCTTACCTTGCAGAATTGTTAAGATTGGAAGAACAAGCTAAACAGGAAGGTGTTGGTCGTTGGAACAAGAGTCCAGGTGCTGCTGAGGCCTCCATCAGAAATCTACCACCTTCAGCCATTGGTGATCCAAGCAACTTGGATGCTATGGGTTTGTTGGCTGCAAACAAAGGCAAGCCAATGGAAGGAATTGTTGAGCAGGTTCGCGATGGCAGTACCCTGCGAGTCTATCTGCTCCCTGAATTTCAGTTTGTCCAAGTTTTCGTGGCTGGAATTCAGTCCCCACAAATGGGAAGGAAAGCTGCATCAGAGCCTGTTGTTGAGTCAGAGGTGACAGCAGATGCTCATGAGGCTAAATTTTTCACCGAGATGAGAGTGTTGAACCGAGATGTGCGGGTTGTCCTTGAAGGTGTTGATAAGTTCAGCAATTTGATTGGGTCAGTGTATTATCCTGATGGTGAATCAGCAAAAGACCTGGCGTTGGAACTTGTTGAAAATGGTTTCGCCAAATATGTTGAATGGAGTGCAAATATGATGGAGGATGAGGCAAAGAGGAAGCTGAAGGCTGCAGAGCTTCAGGCTAAGAAAAGCAGATTGAGGATGTGGACAAACTATGTACCACCAGCAACTAATTCCAAGGCAATTCATGACCAGAATTTTACAGGAAAGGTGGTTGAGGTTGTAAGTGGGGACTGCATCATTGTTGCAGATGATTCCATTCCTTATGGCAGTCCACTAGCAGAGAGACGAGTTAACCTGTCAAGTATTCGATGTCCCAAAATGGGCAATCCTCGTAGAGATGAAAAACCAGCTCCCTATGCTCGTGAAGCAAAGGAGTTCTTGAGAACACGCCTCATTGGCCGTCAAGTTAATGTACAAATGGAGTATTCTAGAAAGGTTAGTCCAGCAGATGGGTCTGCAGCTCCACCTGGAGCTGCTGATGCTAGATCAATGGATTTTGGATCGGTTTTCCTAGCATCAAATGTTAAGAGTGAGGGTGATGGTGTTCCTGCTGGTAGCCAGCAACCCGGGGTCAATGTCGCTGAGTTGGTAGTTGCTCGAGGATTTGGAACTGTCATTAGACATCGGGACTTTGATGAGAGATCAAACTACTATGATGCTCTTCTTGCTGCAGAATCACGTGCCATATCTGGCAAAAAAGGGATCCATTCTGCCAAGGACTCTCCGGTCATGCATATAACTGATCTGACCATTGCATCAGCCAAGAAAGCCAAAGATTTCTTGCCTTTCCTGCACCGGAGTAGAAGAATCCCAGCTGTTGTGGAATATGTCCTCAGCGGCCATCGTTTCAAATTGTTAATTCCAAAAGAAACTTGCAGCATTGCTTTTGCATTCTCTGGTGTTAGATGTCCTGGTCGTGACGAGCCATATTCTGAGGAAGCAATTGCACTGATGAGGCGAAAGATTATGCAGAGAGATGTTGAGATTGAAGTGGAAACTGTTGATAGAACTGGAACGTTCTTGGGATCCTTATGGGAGTCAAGGACAAATGTAGCAGTTACACTCCTTGAAGCTGGTCTTGCAAAACTTCAAACATCCTTTGGCAGTGACAGAATTCCTGATTTACACCTTCTGGAGCAAGCTGAACAATCTGCAAAGAGGCAAAAGCTGAAAATATGGGAGAATTATGTTGAAGGGGAGGAAGTCTCTAATGGTGCAACTGTTGAAAACAAACAGCAAGAAGTTCTTAAGGTTGTGGTTACAGAAGTTTTGGGTGGTGGTAAATTCTATGTTCAACCCGCTGGAGATCAGAAGATAGCATCCATTCAGCAACAGCTTTCTTTTTTGAACCTTCAAGAAGCTCCTCTGCTTGGTGCTTTCAGTCCTAAGAAGGGTGACATAGTCCTTTGTCATTTTCTGGCAGATAAATCATGGTACCGAGCAATGATCGTCAATGGGCCTCGAGGAGCCGTTCAATCTCCCCAGGATAAATTTGAAGTATTCTACATTGATTATGGAAATCAAGAAGAAGTAACTTACAGTCAGTTACGACCACTTGATCCATCTGTCTCTGCCGCTCCTGGTCTTGCTCAACTGTGCAGCCTTGCATACATGAAGGTTCCAAACTTGGAAGAGGACTTTGGCCAAGAAGCAGCTGAATATTTGAGCGAACTCACTTTAGGCAGCGGCAAAGAATTCAGGGCCAAGGTTGAGGACAGAGATGCTTCAGGAGGGAAAACGAAAGGGCAGGGAACTGGGACGGTTCTTGCTGTAACTCTTGTTGCTGTGGATACCGAGATCAGCGTTAATGCTGCCATGCTACAGGAAGGACTTGGTAGGCTTGAAAAAAGGAACAGACGGGACAGAAGAGAGAAACAGCAAGCTCTTGATAATTTAGAGAAATTCCAGGCAGAGGCAAAGACAAGCCGGCGTGGAATCTGGCAGTATGGAGATATTCAGTCGGACGACGAGGACACTGCCCCCCCTGCAAGAAAGGCTAGTGGCCGGAAGTGA 2847 0.4612 MASTATGWYRGRVKAVPSGDCLVIVALTSSRPGALPEKTITLSSLIAPRLARRGGVDEPYAWESREFLRKLCVGKEVTFKIDYNVPSINREFASVFLGDKNVAMLVVAAGWAKIREQGQQKGEASPYLAELLRLEEQAKQEGVGRWNKSPGAAEASIRNLPPSAIGDPSNLDAMGLLAANKGKPMEGIVEQVRDGSTLRVYLLPEFQFVQVFVAGIQSPQMGRKAASEPVVESEVTADAHEAKFFTEMRVLNRDVRVVLEGVDKFSNLIGSVYYPDGESAKDLALELVENGFAKYVEWSANMMEDEAKRKLKAAELQAKKSRLRMWTNYVPPATNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGSPLAERRVNLSSIRCPKMGNPRRDEKPAPYAREAKEFLRTRLIGRQVNVQMEYSRKVSPADGSAAPPGAADARSMDFGSVFLASNVKSEGDGVPAGSQQPGVNVAELVVARGFGTVIRHRDFDERSNYYDALLAAESRAISGKKGIHSAKDSPVMHITDLTIASAKKAKDFLPFLHRSRRIPAVVEYVLSGHRFKLLIPKETCSIAFAFSGVRCPGRDEPYSEEAIALMRRKIMQRDVEIEVETVDRTGTFLGSLWESRTNVAVTLLEAGLAKLQTSFGSDRIPDLHLLEQAEQSAKRQKLKIWENYVEGEEVSNGATVENKQQEVLKVVVTEVLGGGKFYVQPAGDQKIASIQQQLSFLNLQEAPLLGAFSPKKGDIVLCHFLADKSWYRAMIVNGPRGAVQSPQDKFEVFYIDYGNQEEVTYSQLRPLDPSVSAAPGLAQLCSLAYMKVPNLEEDFGQEAAEYLSELTLGSGKEFRAKVEDRDASGGKTKGQGTGTVLAVTLVAVDTEISVNAAMLQEGLGRLEKRNRRDRREKQQALDNLEKFQAEAKTSRRGIWQYGDIQSDDEDTAPPARKASGRK 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03882 948 SMART SNASE_2 7 148 IPR016071 -
Arst3g03882 948 SMART SNASE_2 546 673 IPR016071 -
Arst3g03882 948 SMART SNASE_2 342 516 IPR016071 -
Arst3g03882 948 SMART SNASE_2 183 328 IPR016071 -
Arst3g03882 948 Gene3D - 528 671 IPR035437 -
Arst3g03882 948 ProSiteProfiles Thermonuclease domain profile. 692 927 IPR016071 -
Arst3g03882 948 Pfam Staphylococcal nuclease homologue 818 926 IPR016071 -
Arst3g03882 948 Pfam Staphylococcal nuclease homologue 576 673 IPR016071 -
Arst3g03882 948 Pfam Staphylococcal nuclease homologue 214 327 IPR016071 -
Arst3g03882 948 Pfam Staphylococcal nuclease homologue 40 147 IPR016071 -
Arst3g03882 948 SUPERFAMILY Staphylococcal nuclease 540 674 IPR035437 -
Arst3g03882 948 FunFam Ribonuclease 807 928 - -
Arst3g03882 948 Gene3D - 696 928 IPR035437 -
Arst3g03882 948 PANTHER EBNA2 BINDING PROTEIN P100 49 928 - -
Arst3g03882 948 Gene3D - 7 153 IPR035437 -
Arst3g03882 948 Gene3D - 340 524 IPR035437 -
Arst3g03882 948 Coils Coil 304 324 - -
Arst3g03882 948 ProSiteProfiles Thermonuclease domain profile. 7 148 IPR016071 -
Arst3g03882 948 FunFam Ribonuclease 7 153 - -
Arst3g03882 948 SUPERFAMILY Staphylococcal nuclease 180 332 IPR035437 -
Arst3g03882 948 FunFam Ribonuclease 340 524 - -
Arst3g03882 948 ProSiteProfiles Tudor domain profile. 739 804 IPR002999 -
Arst3g03882 948 SUPERFAMILY Staphylococcal nuclease 4 149 IPR035437 -
Arst3g03882 948 SUPERFAMILY Staphylococcal nuclease 750 933 IPR035437 -
Arst3g03882 948 ProSiteProfiles Thermonuclease domain profile. 342 516 IPR016071 -
Arst3g03882 948 MobiDBLite consensus disorder prediction 916 948 - -
Arst3g03882 948 FunFam Ribonuclease 175 339 - -
Arst3g03882 948 SUPERFAMILY Staphylococcal nuclease 339 518 IPR035437 -
Arst3g03882 948 CDD Tudor_AtTudor1-like 704 819 IPR047395 -
Arst3g03882 948 ProSiteProfiles Thermonuclease domain profile. 546 673 IPR016071 -
Arst3g03882 948 PIRSF RISC-Tudor-SN 1 939 IPR016685 GO:0016442|GO:0031047
Arst3g03882 948 SMART TUDOR_7 738 802 IPR002999 -
Arst3g03882 948 PIRSF RISC-Tudor-SN 1 939 IPR016685 GO:0016442|GO:0031047
Arst3g03882 948 Gene3D - 712 808 - -
Arst3g03882 948 FunFam Ribonuclease 527 671 - -
Arst3g03882 948 ProSiteProfiles Thermonuclease domain profile. 183 328 IPR016071 -
Arst3g03882 948 Pfam Tudor domain 691 814 IPR002999 -
Arst3g03882 948 Gene3D - 175 338 IPR035437 -
Arst3g03882 948 FunFam Serine/threonine-protein kinase 31 712 808 - -
Arst3g03882 948 Coils Coil 889 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03882 Arst-Chr3 110038556 110045242 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03882 K15979 - gmx:100809534 1597.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03882 3 110038556 110045242 Arst3g03882 3 110038556 110045242 PCT