Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03865 ATGTTATGTGTGTGGCATGTATGTTATATCTACCAAGCTGCTACAACACACAAACTAAAGTTAGAAGAGTTTGTAGAAAGGGCTACCTACAAAATCATATCTTTGCATCCTTTACAACAAAACAGAAAGAGAAGAATGGCTTTTTGGAGATCCACAACACTTGAATCCGACAAACACGACTTGAATACCTATGCAAATGCTACAACAACAACAACAGCAACAACGGACAAGGACGCCACTACTACTCATGCTGAGCTCACCAAAATCCCTCTTATGAGAGCCTTCATTGAAACGCACGATCCCTCTTCTATGCATGAAGTGGATGATTTGATGATGAGAAGATTTCTGCGTGCTCGTGATTCAGATGTTGACAAGGCTTGTGCAATGCTCCTCAAGTGCTTGAAATGGAGGCGCTCCTTTGTTCCAAATGGTTTCTTTTCTGTGTCAGAGGTTCCCAATGAAATCTCACAGGACAAGGTCTTCGCCCAAGGACATGACAACAGAGGTCGACCAATCGCTGTTATCTTTGGTGCCAGACATTTCCAAAACAAACAGGGTGGTCTCGATGAATTCAAACGTTTTGTTGTGTATGCATTTGACAAGTTATGTGCCAGTATGCCAGCTGGGCAAGAAAAATTTGTGGGCATTGCAGAACTTAAGGGATGGGGATACTCTAACAGTGACGTGCGTGGATACATTACCGCTCTAAGCATTTTGCAGGATTACTACCCTGAAAGATTAGGCAAGTTGTTTATTCTGCACGCACCTTACATATTTATGAAAGTGTGGAAAGTCATTTACCCCTTCATTGACAACAATACCAGGAAAAAGATTGTATTTGTGGAGAACAAGAAGCTGAAATCAACACTGCTAGAAGATATAGAGGAGAGTCAGCTCCCAGAGATATATGGAGGCCAATTGCCATTAGTCCCAATACAAGATAGCTGA 948 0.4198 MLCVWHVCYIYQAATTHKLKLEEFVERATYKIISLHPLQQNRKRRMAFWRSTTLESDKHDLNTYANATTTTTATTDKDATTTHAELTKIPLMRAFIETHDPSSMHEVDDLMMRRFLRARDSDVDKACAMLLKCLKWRRSFVPNGFFSVSEVPNEISQDKVFAQGHDNRGRPIAVIFGARHFQNKQGGLDEFKRFVVYAFDKLCASMPAGQEKFVGIAELKGWGYSNSDVRGYITALSILQDYYPERLGKLFILHAPYIFMKVWKVIYPFIDNNTRKKIVFVENKKLKSTLLEDIEESQLPEIYGGQLPLVPIQDS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03865 315 CDD SEC14 160 306 IPR001251 -
Arst3g03865 315 SUPERFAMILY CRAL/TRIO domain 150 308 IPR036865 -
Arst3g03865 315 Gene3D - 39 314 IPR036865 -
Arst3g03865 315 PANTHER OS03G0850700 PROTEIN 76 314 - -
Arst3g03865 315 Pfam CRAL/TRIO domain 159 305 IPR001251 -
Arst3g03865 315 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 148 311 IPR001251 -
Arst3g03865 315 SMART CRAL_TRIO_N_2 108 133 IPR011074 -
Arst3g03865 315 SMART sec14_4 154 308 IPR001251 -
Arst3g03865 315 SUPERFAMILY CRAL/TRIO N-terminal domain 78 144 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03865 Arst-Chr3 109549572 109553787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03865 112 300 Acyl Lipid Metabolism Gene Families AT5G47730 27.451 1.12e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03865 - - aip:107634602 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03865 3 109549572 109553787 Arst3g03865 3 109549572 109553787 ECH
Arst3g03865 3 109549572 109553787 Arst3g03865 3 109549572 109553787 PCT