Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03856 ATGGTCCAAACGTTCTGGGACCATCTAATTCTTTGCTGTAAAACAGAAGTTATAAAGAATGATCTCAGCCCACAGTGGAAGCCAGTGTTCTTAAACATTCAACAAGTAGGAGGCAAGTATGTTGAACTTCGTGATTTAGACACAGTGGAAGCTCTCTCATTTTTTCGTTTTTATTATATACGGGACAATCCTTTGATACTAGAGTGTTATAACTTCAATACCAATGGCAAACATGATTTGATAGGAAAAGTGCAAAAGTCTTTGGCAGAGTTGGTGAAGCTTCATGCTAGTGGTCAAGGAGGAACTTTATTTTTGCCTACTGGTGGTGGTCGTAATTCTCATAACAAGGTATTAAAGAGCCGGGTATATCTGGACAAATTTTCTGAAAGTGTCCAATATAGTTTCCTTGATTACTTGTCTGCGGGTTTTGAATTGAACTTCATGGTGGCCATTGATTTTACAGCTTCAAATGGGAATCCACGCCTTCCAGATTCTTTGCATTATATTGATCCTTCAGGACGGCCAAATACATACCAGAAGGTGGAAGGGATCCAAGGAATTATGATGGCATACACAAGTGCCCTGCTTAACGTTTCTCTTGCGGGACCAACTCTTTTTGGACCTGTCATAAGCAATGCTGCACTTATTGCCAGCCAATCTGTAGCAACTGGTGCAAGAAAGTATTTTGTTTTGTTAATATCTCAGATGGAGTGGTGA 717 0.4003 MVQTFWDHLILCCKTEVIKNDLSPQWKPVFLNIQQVGGKYVELRDLDTVEALSFFRFYYIRDNPLILECYNFNTNGKHDLIGKVQKSLAELVKLHASGQGGTLFLPTGGGRNSHNKVLKSRVYLDKFSESVQYSFLDYLSAGFELNFMVAIDFTASNGNPRLPDSLHYIDPSGRPNTYQKVEGIQGIMMAYTSALLNVSLAGPTLFGPVISNAALIASQSVATGARKYFVLLISQMEW 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03856 238 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 92 IPR035892 -
Arst3g03856 238 Pfam Copine 177 233 IPR010734 -
Arst3g03856 238 Gene3D C2 domain 7 131 IPR035892 -
Arst3g03856 238 PANTHER COPINE 180 233 IPR045052 GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03856 Arst-Chr3 109446280 109449142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03856 - - adu:107480127 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03856 3 109446280 109449142 Arst3g03856 3 109446280 109449142 ECH
Arst3g03856 3 109446280 109449142 Arst3g03856 3 109446280 109449142 PCT