Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03852 ATGCCTTCTCCAATGGTGGATCAGAGGGGAGTTTCTGCTTCATCTCACTTTTTTGATGACATTTCTTTTCGTTCTGAGAGGGATGCTGGAATACGGAAGTTCAAATCCATTCATGATCAATATCCACAAGGAAAAAATGGAATGATAGCATCCCCTGGAAGCAATTTGAATTCTTCATCTGTACTGGAAAGAAGTGCAAAATCTGGTTTGCCAATGTCATGCACCAGTCTATCTATTGAAAATGTGGAACAGCTAAAATTTGGTGGTGAAGGCATTTTTGATGCGCTGATGGTTTCCAAGGAATCATCACATTATCATCACAGATCAAGGTCTGATTTATGTATGCGCTCCGGACCGAACTCACCTGGTGTAATCGGGGACAAGTTTGTTTCCAGTGCAGCCACATGTGAAAGTACTTTATTCTCGAGCTCATTGTCTGATATGTTTTGCCAAAAGTTGAGGTTGTTCGGGAAAGATGCTTTATCTGATCAGCCCGATATTATTGATTCTGTTCCCGAGGAAGAGCCTTATAAATCTCTTGAAGAAATAGAGGCTGAAACTATAGGGAATCTCCTTCCTGATGAAGATGATCTGTTTTCTGGTGTCAATGATGAGTCAAGATATAACAATACTAATGCCAGAAAAAATGATGACTTGGAGGATTTTGACTTGTTTAGCAGTGGGGGAGGCATGGAGCTGGAAAGAGATGAACATCTGAATGCAGGATTAAGAACTAGTGCTCTGGAGGGAGATTCAGGTTTTGTTGGAGGTCCTAAAGGAAAATTTCCTTTTGTCACACAACCTTCTAGAACACTCTTTGTTCGGAACATTAATAGCAACGTAGACGACTCTGAGCTAAAGGCTCTCTTTGAGGTCAATGCTTCTGAGAAGGATATTGGCCATGGTACGCTGATGCTATCTGGTCTTGATTCATCTATTTCAAATGATGAACTCAAACAGATTTTTGGATTTTATGGAGATATTAAAGAAATTTTTGAATCTCCTGAAATGAAACAGCACAAATTTATAGAGTTTTATGATGTACGAGCTGCAGAAGCTGCTCTTCGTGCATTGAACAGGGTTGACATTGCTGGGAAGCAGATCAAGATTGAACCAGGACATCCTAGTTTGATGCAGCAGTCTCATAAGGGGCAAGATGAACCAGATCTTGGTCAGAATATTATTGACAACTTAGCACTGAGACAGAAGACAACTGTGTCTCCTGGAGTGATTGGGTCTGGCTTGGAAAATGGTTACAATCAGGGATTTCAATCTGGAATGGCGCAACCTTTAAACACATATACTGATAATGCATTTGGACATATAAATTCTAGCATTCACAACACAGTGAGAGGGTCATCAGCTTCAAATGTTTCTGGCGTTTCTGAGTCCAATATATTTGTTGACGCAATAAAATTTGCTTCTAGTCCGAGATTTCATCCTCATTCCTTACCCGAGTATCATGATACTTTAGCTAATGGTAGTCCTTATAACTTTTCAAGCACCATTAGCAACATGACTAGCAGTGTCAATACTGGAGTGACCGAAGCCTCTGACAGCAGGCACAATCAGGGAATGAGCTCAACTGGGAACTTAGCAGAATTTAATGCAGGAGGAAATGGGATCCGGTCACATCATGGACTTTATCAGATGTGGAACAGCTCCAATTTGCATCAGCAGTCTTCGTCAGGTACCATGCTGTGGCAGAAAAGACCATCATTTGTTAATCTTCCACAGATGCCAAGCTTTGCCAGAACACCACCTCATATGTTGAGGTCACAACACATGGACCACAATGTTGCATCAGCACCAGTGTCACCTTGGGGAAGGCAACATTCGCACCTAGCAGAATCCCCTGATGCTTCTGGTTTTGTGGGAAGTGGAGGTTTTCAGGGTTCCTGGCAATTGCTTTCTCCAGAATTTTCTCCTCGCTTGTTTCCTCATGCAAGTCCTAAAGGCACTGAACTGCCATCCAATGCTGGGCAGAGTTCTCCTAAGCATCATGGTTTCCCTGGAAGACATTCTATGAATTCAACGTCAAAATTTGATTCTGCCAATGAACGAATGAGAAGCCTTTATCACCGTAGGAGTGAAACAAACAATGCTGATAAAAAACAATTTGAGCTTGACCTAGGTCGCATAATGCAGGGGGAAGACACCCGAACAACACTTATGATAAAAAATATTCCCAACAAGTATACCTCAAAGATGCTTCTTGCTGCTATTGATGAGCGTTGTAGGGGAACTTACGATTTTCTGTATTTGCCAATTGACTTCAAGAATAAATGTAATGTTGGTTATGCATTTATAAATATGATCGATGCTGCTCAAATTATTCCTTTCCACCAGGCTTTTAATGGGAAAAAATGGGAGAAGTTCAATAGTGAAAAGGTAGCCTCACTTGCATATGCCCGAATTCAAGGAAAAGCTTCTCTCATTGCCCATTTCCAGAACTCAAGCCTGATGAATGAAGATAAACGTTGCCGCCCTATTCTCTTCCACACTGATGGTCCAAATGCTGGTGATCCAGAGCCTTTTCCCATGGGTACCAATATTAGAGTGAGACCTGGAAAATCTCGCACTGCTGGTAATGACGAAAGTCGCAACCAACCAAGTCCAAGAATTTTGATAAATGTAGAGTCTCCTAATGGACTTGACTCTGCTTAG 2667 0.4158 MPSPMVDQRGVSASSHFFDDISFRSERDAGIRKFKSIHDQYPQGKNGMIASPGSNLNSSSVLERSAKSGLPMSCTSLSIENVEQLKFGGEGIFDALMVSKESSHYHHRSRSDLCMRSGPNSPGVIGDKFVSSAATCESTLFSSSLSDMFCQKLRLFGKDALSDQPDIIDSVPEEEPYKSLEEIEAETIGNLLPDEDDLFSGVNDESRYNNTNARKNDDLEDFDLFSSGGGMELERDEHLNAGLRTSALEGDSGFVGGPKGKFPFVTQPSRTLFVRNINSNVDDSELKALFEVNASEKDIGHGTLMLSGLDSSISNDELKQIFGFYGDIKEIFESPEMKQHKFIEFYDVRAAEAALRALNRVDIAGKQIKIEPGHPSLMQQSHKGQDEPDLGQNIIDNLALRQKTTVSPGVIGSGLENGYNQGFQSGMAQPLNTYTDNAFGHINSSIHNTVRGSSASNVSGVSESNIFVDAIKFASSPRFHPHSLPEYHDTLANGSPYNFSSTISNMTSSVNTGVTEASDSRHNQGMSSTGNLAEFNAGGNGIRSHHGLYQMWNSSNLHQQSSSGTMLWQKRPSFVNLPQMPSFARTPPHMLRSQHMDHNVASAPVSPWGRQHSHLAESPDASGFVGSGGFQGSWQLLSPEFSPRLFPHASPKGTELPSNAGQSSPKHHGFPGRHSMNSTSKFDSANERMRSLYHRRSETNNADKKQFELDLGRIMQGEDTRTTLMIKNIPNKYTSKMLLAAIDERCRGTYDFLYLPIDFKNKCNVGYAFINMIDAAQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKASLIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPMGTNIRVRPGKSRTAGNDESRNQPSPRILINVESPNGLDSA 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03852 888 MobiDBLite consensus disorder prediction 601 623 - -
Arst3g03852 888 SUPERFAMILY RNA-binding domain, RBD 232 291 IPR035979 GO:0003676
Arst3g03852 888 PANTHER RNA RECOGNITION MOTIF-CONTAINING 82 291 - -
Arst3g03852 888 FunFam Protein MEI2-like 1 301 392 - -
Arst3g03852 888 MobiDBLite consensus disorder prediction 863 888 - -
Arst3g03852 888 Pfam RNA recognition motif 2 721 817 IPR007201 -
Arst3g03852 888 CDD RRM3_MEI2_like 724 809 IPR034454 -
Arst3g03852 888 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 304 369 IPR000504 GO:0003723
Arst3g03852 888 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 302 375 IPR000504 GO:0003723
Arst3g03852 888 MobiDBLite consensus disorder prediction 836 888 - -
Arst3g03852 888 SUPERFAMILY RNA-binding domain, RBD 303 790 IPR035979 GO:0003676
Arst3g03852 888 Gene3D - 300 392 IPR012677 -
Arst3g03852 888 SMART rrm1_1 723 799 IPR000504 GO:0003723
Arst3g03852 888 SMART rrm1_1 303 371 IPR000504 GO:0003723
Arst3g03852 888 MobiDBLite consensus disorder prediction 644 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03852 Arst-Chr3 109387648 109395437 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03852 - - gmx:106798747 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03852 3 109387648 109395437 Arst3g03852 3 109387648 109395437 ECH