Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03777 ATGGCTGCAATTCAGAAGCTACTGAACATTGCATTGCCCCCACTATCATTGGTGCTTCTATCCTCGTTCATGATACCTTTCCTTATCTTCAAGTTGCAGTTAATAAACCTTTGTTTAATTTATTTTGGAAAGCAACTAGCATATGAATATGGAAGGAGAGGAGCAGTTTTATCACTGGTTGACATTAGGGAGGACAATCTTGTAGTTGTGGCTGAAAAGGCCAGATCTCTGGGTTCTCCTGATGTTATCATCATCGCTGCAGATGTTTCAAAGCTCCAAGACTGTCGTCGTTTTGTGGATCAAACAGTTAATCATTTTGGACGATTGGATTGTTTGGTGAATAATGCTGGAATTGGCAAGCCTTCAGGATTCAAAGATTGGAGTAATGCTTCTGAATTTACTCCAATGATGGACGTAAATTTCTGGGGATCAGTTTATGGCACTTTATGTGCAATCCCACATCTGAAAACAAGCAGAGGCAGGATCATTGTGATTGCATCGGTTTTTGGATGGTTCCCTCTCCCAAAAAGCAGTATCTATAGTGCAAGCAAGGCAGCGGCTATAAACTACTTTGAGACTCTCAGGATGGAACTTGGTCGTGCTATTAGCATAACAATAGTCACACCTGGTTTGATCAACACGGATCTAGGATTAACTGTAGTAAAAGAGGAGCGTATAATGGAAATAATTCCACTGTTATCAGCATCTGAATTAGCAGAAAGCATAGTGAAAAGCGCATGCAGGGGAGATATGTACTTGACAGAGCCATCTTGGGTCAAGGTTTTGTTTCCTTTCAAGCTGCTTTATCCTCAACTAGTAGACTCGGCCGTACGCTCCTTTATTGGGCTTTCCCGAAAAATAAATAATTCTGCAACAGAGCTGAAGCTAGAGTAA 894 0.4116 MAAIQKLLNIALPPLSLVLLSSFMIPFLIFKLQLINLCLIYFGKQLAYEYGRRGAVLSLVDIREDNLVVVAEKARSLGSPDVIIIAADVSKLQDCRRFVDQTVNHFGRLDCLVNNAGIGKPSGFKDWSNASEFTPMMDVNFWGSVYGTLCAIPHLKTSRGRIIVIASVFGWFPLPKSSIYSASKAAAINYFETLRMELGRAISITIVTPGLINTDLGLTVVKEERIMEIIPLLSASELAESIVKSACRGDMYLTEPSWVKVLFPFKLLYPQLVDSAVRSFIGLSRKINNSATELKLE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03777 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 280 IPR036291 -
Arst3g03777 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 IPR002347 -
Arst3g03777 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 IPR002347 -
Arst3g03777 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Arst3g03777 297 Pfam short chain dehydrogenase 42 219 IPR002347 -
Arst3g03777 297 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 167 195 IPR020904 GO:0016491
Arst3g03777 297 PRINTS Glucose/ribitol dehydrogenase family signature 180 199 IPR002347 -
Arst3g03777 297 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Arst3g03777 297 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Arst3g03777 297 PRINTS Glucose/ribitol dehydrogenase family signature 200 217 IPR002347 -
Arst3g03777 297 Gene3D - 41 289 - -
Arst3g03777 297 PANTHER RETINOL DEHYDROGENASE-RELATED 43 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03777 Arst-Chr3 106969745 106971927 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03777 81 232 Acyl Lipid Metabolism Gene Families AT1G24360 30.128 1.53e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03777 K22418 - gmx:100808990 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03777 3 106969745 106971927 Arst3g03777 3 106969745 106971927 ECH