Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03774 ATGGCTGCAATTCAGAAGCTACTGAACATTGCATTGCCCCCACTATCATTGGTGCTTCTATCCTCGTTCATGATACCTTTCCTTATCTTCAAGGTTTTTATTTATGTAAGGAATTTGTTTCAAACCGATGAAAAATTGGAAAACAAGGTTGTACTAATCACCGGGGCAGCCTCAGGGATTGGCGAGGTTTGCTCCACTCTCTCCGCAGTGGATTGTTTGGTGAATAATGCTGGAATCGGCAAGCCTTCGGGATTCAAAGATTGGAGTAATGCTTCTGAATTTACTTCAATTATGGACGTAAATTTCTGGGGATCAGTTTATGGCACTTTATGTGCAATCCCACATCTGAAAACAAGCAGAGGCAGGATCGTTGTGATTGCATCGGCTCTTGGATGGTTCCCTCTCCCAAGATTCAGTATCTATAGTGCAAGCAAGGCAGCGATTATAAACTACTTTGAGACTCTGAGGATGGAACTTGGTTGTGCTATTGGCATAACAATAGTCACACCAGGTGTGGTCAAAACGGATCTGGGAGTAACTCTAATAAAAGAGGAGCGTATAATGGACATAATTCCAATGTTATCAGCATCTGAATTAGCAGAAAGCATAGTGAAAAGCGCATGCAGGGGAGATATGTACTTGACAGAGCCATCTTGGGTCAAGGTTTTGTTTCCTTTCAAGCTGCTTTATCCTCCACTAGTAGACTGGGCCTCACGCCTCTTCTTTGCTCTTTCCCCAAAAATAAATAATTCTGCAACAGAGCTGAAACCAGAGTAA 777 0.426 MAAIQKLLNIALPPLSLVLLSSFMIPFLIFKVFIYVRNLFQTDEKLENKVVLITGAASGIGEVCSTLSAVDCLVNNAGIGKPSGFKDWSNASEFTSIMDVNFWGSVYGTLCAIPHLKTSRGRIVVIASALGWFPLPRFSIYSASKAAIINYFETLRMELGCAIGITIVTPGVVKTDLGVTLIKEERIMDIIPMLSASELAESIVKSACRGDMYLTEPSWVKVLFPFKLLYPPLVDWASRLFFALSPKINNSATELKPE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03774 258 PRINTS Glucose/ribitol dehydrogenase family signature 141 160 IPR002347 -
Arst3g03774 258 PRINTS Glucose/ribitol dehydrogenase family signature 161 178 IPR002347 -
Arst3g03774 258 PRINTS Glucose/ribitol dehydrogenase family signature 115 131 IPR002347 -
Arst3g03774 258 PRINTS Glucose/ribitol dehydrogenase family signature 50 67 IPR002347 -
Arst3g03774 258 Pfam short chain dehydrogenase 65 181 IPR002347 -
Arst3g03774 258 Gene3D - 62 249 - -
Arst3g03774 258 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 IPR002347 -
Arst3g03774 258 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 IPR002347 -
Arst3g03774 258 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 IPR002347 -
Arst3g03774 258 PANTHER RETINOL DEHYDROGENASE-RELATED 67 244 - -
Arst3g03774 258 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 128 156 IPR020904 GO:0016491
Arst3g03774 258 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 243 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03774 Arst-Chr3 106698638 106700224 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03774 70 193 Acyl Lipid Metabolism Gene Families AT1G24360 28.125 1.83e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03774 K22418 - gmx:100808990 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03774 3 106698638 106700224 Arst3g03774 3 106698638 106700224 ECH