Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03771 ATGGACCTGATTCATACGTTTCTGAACCTTGTAGCTCCTCCCTTCACCTTCTTTTTCCTATGCCTGTTCTTGCCACCGTACTGGGGCCTCAAGTTTATGGTGTCCATCCTAAGCTGGTTGCTGAGTGAGAATGTGGCTGGTAAAGTGGTTCACATCACAGGTGCTTCCTCTGGCATTGGGGAGTATTTGGCGTACGAGTATGCAAAGAGGGGTGCTTGCCTTGCGCTTTCTGCGAGGAGGGAAACTGCCCTCCATCAAGTTGCTGACACAGCCCGTCATCTTGGATCTCCCGATGTTATCGTTATGCGTGCCGATGTTTCCAAGCCTGAGGACTGCATGCGATTGATCGACCAAACTGTCAATCATTTTGGAAGACTGGATCACCTTGTAAATAACGCGGCAATCAGCATTGCTACCTTGTTTGAAGAAACCCCTGATATCTCCAATTTGAGGCCTATCATGGAAACAAACTTTTGGGGATCAGTATACACAACCCGTTATGCATTACAGCATCTGAGGAAGAGCAGAGGCAAAATCGTGGTCATGTCATCTGTAGATTCATGGTTGCCTGCGCCCAGAAGGCACATCTATAGCGCAAGCAAAGCAGCATTGGTGAGCCTGTATGAAACGCTGAGGGTGGAGGTCGGGTCGGAAATAGGCATAACAATCGTGACACCGGGGTACATAGAGTCGGAAATAACGAAAGGGAAGTTCCTAAGCGCACAAGGGGAGGTCGATGTTGATCAGGATCTGAGAGACGTGGAGGTGAGCGCAGTGCCGGTGGGGTCAGTGAGTGGATGCGCCGAATCGATAATAAAGAGCACTTTGAGGGGAGACAGGTGCCTAACTGTACCCTCATGGTTCAGGATGACATACCTCATCAAACTCCTCTGCCCTGAGCTTCTCGAGTGGACCTTCAGGTTGCTGTATCTAACTGCACCCGGAACTCCCACAAGTGATGCACTTAGCAAGAAGATTCTAGACGCCACCGGTGCCAAGAACTTGTTCTACCCTCCTTCCATCCAATCCCCTGATGTCAAGACTGAT 1047 0.4995 MDLIHTFLNLVAPPFTFFFLCLFLPPYWGLKFMVSILSWLLSENVAGKVVHITGASSGIGEYLAYEYAKRGACLALSARRETALHQVADTARHLGSPDVIVMRADVSKPEDCMRLIDQTVNHFGRLDHLVNNAAISIATLFEETPDISNLRPIMETNFWGSVYTTRYALQHLRKSRGKIVVMSSVDSWLPAPRRHIYSASKAALVSLYETLRVEVGSEIGITIVTPGYIESEITKGKFLSAQGEVDVDQDLRDVEVSAVPVGSVSGCAESIIKSTLRGDRCLTVPSWFRMTYLIKLLCPELLEWTFRLLYLTAPGTPTSDALSKKILDATGAKNLFYPPSIQSPDVKTD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03771 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 310 IPR036291 -
Arst3g03771 349 Pfam short chain dehydrogenase 48 236 IPR002347 -
Arst3g03771 349 PANTHER RETINOL DEHYDROGENASE-RELATED 46 315 - -
Arst3g03771 349 PRINTS Glucose/ribitol dehydrogenase family signature 171 187 IPR002347 -
Arst3g03771 349 PRINTS Glucose/ribitol dehydrogenase family signature 197 216 IPR002347 -
Arst3g03771 349 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Arst3g03771 349 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Arst3g03771 349 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Arst3g03771 349 Gene3D - 38 312 - -
Arst3g03771 349 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 184 212 IPR020904 GO:0016491
Arst3g03771 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Arst3g03771 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 185 IPR002347 -
Arst3g03771 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 197 216 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03771 Arst-Chr3 106471873 106473437 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03771 43 262 Acyl Lipid Metabolism Gene Families AT1G24360 28.251 5.12e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03771 K22418 - pvy:116105445 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03771 3 106471873 106473437 Arst3g03771 3 106471873 106473437 ECH