Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03755 ATGGCCATAACCAAAACCCTCTCCATCTTCCTCGTCCTCGCCACCACATACCTCGCTGCCGCCAGGGCAGCACAGTTTGACATAATCAACAAATGCTCCTACACCGTCTGGGCCGCCGCGGTGCCCACCGGAGGCGGCCGGCAGCTTAACTCTGGCCAAACATGGACCATTCAGGTTGCCGCCGGCACGACCGCAGTACGGATTTGGGCCCGAACAGGATGCAGCTTCGACGGTTCAGGAAACGGACACTGCAACACCGGCGACTGCGGCGGTCGGCTCCAGTGCAGCGCATACGGCCAACCACCAAACACGCTGGCAGAATTCGCCCTAAACCAATACAACAACCTGGACTTCTACGACATATCCTTGGTGGACGGTTTCAACGTTCCGATGCAGTTCAGCCCCACCTCAAACGGATGCACGCGCTCCATTAGCTGCACTGCCGACATCATCGGACAGTGCCCTAGCCAGCTGAAGACTAATGGCGGCTGCAACAACCCTTGCACTGTTTTCAAGACGGATCAGTATTGTTGCAATTCTGGTAGCTGCAGCGCCACTGATTATTCAAAATATTTTAAGACTAGGTGCCCTGACGCATACAGTTACCCTAAGGATGACCAGACAAGCACGTTTACTTGCCCGGGAGGAACCAACTACAAGGTTGTCTTTTGCCCTTGA 678 0.5516 MAITKTLSIFLVLATTYLAAARAAQFDIINKCSYTVWAAAVPTGGGRQLNSGQTWTIQVAAGTTAVRIWARTGCSFDGSGNGHCNTGDCGGRLQCSAYGQPPNTLAEFALNQYNNLDFYDISLVDGFNVPMQFSPTSNGCTRSISCTADIIGQCPSQLKTNGGCNNPCTVFKTDQYCCNSGSCSATDYSKYFKTRCPDAYSYPKDDQTSTFTCPGGTNYKVVFCP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03755 225 Gene3D Thaumatin 24 225 IPR037176 -
Arst3g03755 225 PANTHER OS03G0233200 PROTEIN 11 225 IPR001938 -
Arst3g03755 225 SMART tha2 26 225 IPR001938 -
Arst3g03755 225 Pfam Thaumatin family 30 225 IPR001938 -
Arst3g03755 225 SUPERFAMILY Osmotin, thaumatin-like protein 24 225 IPR037176 -
Arst3g03755 225 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Arst3g03755 225 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Arst3g03755 225 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Arst3g03755 225 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Arst3g03755 225 PRINTS Pathogenesis-related protein signature 215 224 IPR001938 -
Arst3g03755 225 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Arst3g03755 225 ProSiteProfiles Thaumatin family profile. 23 225 IPR001938 -
Arst3g03755 225 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Arst3g03755 225 FunFam Thaumatin I 24 225 - -
Arst3g03755 225 PIRSF PR5 1 225 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03755 Arst-Chr3 105749911 105750802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03755 9 225 Receptor kinase-like Gene Family AT5G38280 36.626 4.00e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03755 - - vra:106767605 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03755 3 105749911 105750802 Arst3g03755 3 105749911 105750802 ECH
Arst5g01309 5 14110166 14111117 Arst3g03755 3 105749911 105750802 PCT