Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03664 ATGTCTTCTCCAAGCAAACGTCGAGACATGGACTTGATGAAACTGATGATGAGTGATTACAAGGTGGAAATGATGAACGATGGCATGCAAGAGTTCTTTGTAGAATTTCGCGGACCAAAAGACAGTCCCTATCAAGATGGTGTGTGGAAGATTAGGGTGGAGCTACCTGATGCTTATCCTTATAAGTCCCCCTCTATTGGTTTTGTAAACAAAATTTACCACCCCAATGTTGATGAAATGTNNGGATCAGTTTGCTTAGATGTTATTAACCAGACTTGGAGTCCCATGTTTGACCTTGTTAATGTGTTTGAAGTGTTTCTTCCTCAACTTCTTCTGTACCCGAACGCATCAGATCCGTTGAATGGTGATGCTGCTGCCTTAATGATGCGAGATCATGCAGCATATGAACAAAAAGTCAAAGAATATTGTGAAAAATATGCCAAGCCAGAAGATATTGGAGCTACTCAGGAAGAAAATTCAAGTGACGATGAGCTAAGTGAAGAAGAATATGATGCCTCTACTGATGACGCCATTGCAGGGGAACCTGATCCTTAG 555 0.4126 MSSPSKRRDMDLMKLMMSDYKVEMMNDGMQEFFVEFRGPKDSPYQDGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMXGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNASDPLNGDAAALMMRDHAAYEQKVKEYCEKYAKPEDIGATQEENSSDDELSEEEYDASTDDAIAGEPDP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03664 184 CDD UBCc 10 143 IPR000608 -
Arst3g03664 184 SMART ubc_7 4 148 - -
Arst3g03664 184 Gene3D Ubiquitin Conjugating Enzyme 1 161 IPR016135 -
Arst3g03664 184 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 148 IPR000608 -
Arst3g03664 184 SUPERFAMILY UBC-like 5 148 IPR016135 -
Arst3g03664 184 Pfam Ubiquitin-conjugating enzyme 11 142 IPR000608 -
Arst3g03664 184 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Arst3g03664 184 MobiDBLite consensus disorder prediction 146 184 - -
Arst3g03664 184 MobiDBLite consensus disorder prediction 156 184 - -
Arst3g03664 184 FunFam Ubiquitin-conjugating enzyme 5, E2 1 159 - -
Arst3g03664 184 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 29 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03664 Arst-Chr3 101616203 101618684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03664 3 117 Miscellaneous Gene Families AT3G17000 24.390 6.49e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03664 K10576 - gmx:100791133 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03664 3 101616203 101618684 Arst3g03664 3 101616203 101618684 ECH