Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03646 ATGTTAACATACCAACATCTAAAGTCTAAACTCGGCATCTGTTCTCCGAGAAAACCTCAGGTCATGGATACATTGTTATTGTTACTACTAGTTCTTATGTTTGTTCCACCAAGTCTAAACATGGTAGAGAGTCGCAAGGCTCCAATTTCGGACTACTTTGAGTACAGTGCTGTTAACTGCAGAGCTTACAGTGCATCGCTCACAGATTTTGGTGGTGTTGGGGATGGAACAACTTTGAACACAAAGGCTTTTCAATCAGCCATAGATCATATGAGCCAGTTCTCATCAACTGGAGGCTCTCAACTCTTTGTTCCTCCCGGAAGATGGTTAACCGGTAGCTTCAATCTCACTAGCCACTTCACTCTATTCCTACACCAAGATGCTGTCATCCTTGCCTCTCAGGATGAGAGTGACTGGCCACTCATTGATCCCTTGCCGTCGTACGGCCGAGGGAGGGATGCGCAAGGTGGAAGGTATAGCAGTCTAATTTTTGGAACCAACCTTACAGATGTGATCATCACTGGGGACAATGGTACAATAGATGGACAAGGCGATGTTTGGTGGAAAAAATTCCACAAGGGTGATCTCAGTTATACTAGGCCTTACCTTATTGAAATAATGTATTCAGAGAATGTTCAGATATCTCATCTAACTTTGGTCAATTCTCCTTCCTGGAATGTTCATCCTGTATATAGCAGCAATATTGTTGTTCAAGGGATCACAATACTTGCTCCAGTTAATTCACCAAATACTGATGGAATCAACCCTGACTCATGCACAAACACAAGAATTGAGGACTGCTACATTGTTTCTGGGGATGATTGTGTGGCGGTTAAGAGTGGTTGGGATGAGTATGGTATAGCATATGGAATGCCAACGAAACAACTAGCAATCCGGCGCCTGACGTGCATTTCACCAACCAGCGCTGTGATAGCGTTGGGGAGTGAAATGTCCGGTGGGATTGAGGATGTGAGGGCTGAGGACATTGTAGCCATCAACTCAGAATCAGGTGTTAGGATCAAAACTGCTGTAGGAAGAGGAGGCTATGTTAAGGACATATATGTGAGAAGGATGACTATGAGTACCATGAGATGGGCATTTTGGATGACAGGAAATTATGGTTCTCATGCTGACAACAACTATGATCCCAATGCACTTCCTCTCATTCAGAACATCAATTACCGGGACATGGTTGCTCAGAATGTGACTATGGCAGCAAGATTGGAGGGTATATCCAATGCTCCATTCACTGGCATATGTATATCCAATGTGACTATTCAACTATCAAAGAAACCTTACAAAGTTCAATGGAATTGCACCAATGTGGCTGGGATTTCTAGTGGTGTGACTCCAGAGCCATGTATGCTGTTGCCAGATCAGGGACCGGAGAAGATTGGGGTATGTACCTTCCCAGAAGATGGTTTGCCCATCGATGATGTCAAGTTCCAAACTTGCACTTATGCAAGGCATTTATGA 1476 0.4397 MLTYQHLKSKLGICSPRKPQVMDTLLLLLLVLMFVPPSLNMVESRKAPISDYFEYSAVNCRAYSASLTDFGGVGDGTTLNTKAFQSAIDHMSQFSSTGGSQLFVPPGRWLTGSFNLTSHFTLFLHQDAVILASQDESDWPLIDPLPSYGRGRDAQGGRYSSLIFGTNLTDVIITGDNGTIDGQGDVWWKKFHKGDLSYTRPYLIEIMYSENVQISHLTLVNSPSWNVHPVYSSNIVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLAIRRLTCISPTSAVIALGSEMSGGIEDVRAEDIVAINSESGVRIKTAVGRGGYVKDIYVRRMTMSTMRWAFWMTGNYGSHADNNYDPNALPLIQNINYRDMVAQNVTMAARLEGISNAPFTGICISNVTIQLSKKPYKVQWNCTNVAGISSGVTPEPCMLLPDQGPEKIGVCTFPEDGLPIDDVKFQTCTYARHL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03646 491 Pfam Glycosyl hydrolases family 28 160 443 IPR000743 GO:0004650|GO:0005975
Arst3g03646 491 SUPERFAMILY Pectin lyase-like 59 484 IPR011050 -
Arst3g03646 491 Gene3D - 49 448 IPR012334 -
Arst3g03646 491 SMART pbh1 350 371 IPR006626 -
Arst3g03646 491 SMART pbh1 232 258 IPR006626 -
Arst3g03646 491 SMART pbh1 259 280 IPR006626 -
Arst3g03646 491 SMART pbh1 321 342 IPR006626 -
Arst3g03646 491 PANTHER PECTIN LYASE-RELATED 38 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03646 Arst-Chr3 100472031 100474212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03646 53 490 Glycoside Hydrolase AT4G23500 75.114 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03646 - - gmx:100785841 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03646 3 100472031 100474212 Arst3g03646 3 100472031 100474212 ECH