Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03529 ATGGAAAAGCTTCTGAAGCTGATTTCCATTTTGGCAGTGTTTCTGCATCTGTGTGCATATTCCGCCATTGGAGGGCATGACTATGGGCAAGCTCTGAGTAAGAGCATTCTGTTCTTTGAAGCTCAGAGATCTGGTGTTCTCCCCCATAACCAGAGAGTCAGTTGGAGATCCCATTCAGGTCTCCAAGACGGCAAGGCCAGCGGGGTGGATCTAGTAGGAGGGTACTATGATGCAGGGGACAATGTGAAGTTTGGGTTACCCATGGCATTTACTGTTACAATGATGTCGTGGAGCATCATTGAATATGGGAAGCAAATGGCTGCTAACGGAGAGCTTGGTCATGCCATGGAAGCTGTCAAATGGGGCACTGACTACTTCATCAAAGCCCATCCTCAACCCAATGTCCTCTATGGAGAGGTGGGAGACGGTAACAGCGACCACTACTGTTGGCAAAGACCTGAGGACATGACTACTGACCGTCACGCTTACAAGGTTGATCCCAGCAACCCTGGCTCAGATCTCGCTGGAGAAACTGCCGCTGCAATGGCTGCTGCTTCCATTGTTTTCCGCCACTCTAATCCTTCCTATTCCGCCGAGCTCCTCCGCCATGCCTATCAGCTATTTGATTTTGCGGATAAATACAGAGGTAAATATGACAGCAGTATTACAGTTGCACAGAAGTATTACAGATCCATCAGTGGCTACAATGACGAGTTGCTCTGGGCTGCTGCATGGTTGTATCAAGCATCTAACAACCAATACTACTTGGATTACCTTGGTAGAAACGGTGATTCCATGGGTGGAACTGGTTGGGGCATGACTGAATTCGGTTGGGACGTTAAATATGCTGGGGTTCAAACACTAGTGGCCAAGTTCCTAATGCAAGGGAAAGCAGGTCACAATGCAGCATTGTTTGAAAAGTATAAACAGAAGGCTGAGTATTTCATGTGTTCATGCCTTGGAAAGGGTTCTCGCAACGTTCAGAAGACCCCTGGCGGTCTCATCTTCCGCCAGAGATGGAACAATATGCAGTTTGTGACAAGTGCATCTTTCTTAGCCACTGTCTACTCCGATTACCTTGCTTCGTCTCGTGGAACCTTGAGGTGTTCTTCTGGCAGTGTTGCTCCTGCTGAGCTTCTCAATCTTGCCAAGTCTCAGGTGGATTACATTCTTGGGGACAACCCAAGAGCCACCAGTTACATGGTGGGGTATGGAAGCAACTTCCCTCAGAGAACTCACCATAGAGGTTCATCCATTGTTTCCATCAAGGTTAACCCTTCATTTGTTAGTTGCCGTGGAGGCTATGCAACTTGGTTTAGCAGCAAGAAAAGCGACCCCAACCTACTCACCGGTGCTCTTGTTGGTGGTCCTGATGCATATGATAATTTTGCTGATGAAAGGGACAACTATGAGCAAACTGAGCCAGCAACCTACAACAATGCTCCTTTGATTGGTATTCTAGCAAGATTAAGTGGAGGTCATGGTCGCTATAACCAGCTCCTTCCAGTTGCTGTTCCAGCTCCCAAGCCTGTTGTCACCAAGCCCCAACCATCATCCCCTGTTAGTCCCAAGTTAACTCCTACTCCAGTTTCAGGAGCAGGTCCAATATCCATTCAACAGAAAATGACCACTTCATGGTTTGCCGGTGGAAAAACATACTACAGATACTCAACAGTGGTCACTAACAAATCCAGCAAGGATCTCAAGTCTCTCAATCTTTCAATTTCCAAGCTTTATGGTCCAATCTGGGGCCTCACTAAGTCTGGGGACTCGTACACTTTCCCATCGTGGCTTCCCTCATTATCAGCTGGTAAAAGCCTTGAGTTTGTCTACATTCATGCTGCCTCTCAAGCCGACGTCTCGGTTGCTAACTACTCGTTGGCCTGA 1887 0.4769 MEKLLKLISILAVFLHLCAYSAIGGHDYGQALSKSILFFEAQRSGVLPHNQRVSWRSHSGLQDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAANGELGHAMEAVKWGTDYFIKAHPQPNVLYGEVGDGNSDHYCWQRPEDMTTDRHAYKVDPSNPGSDLAGETAAAMAAASIVFRHSNPSYSAELLRHAYQLFDFADKYRGKYDSSITVAQKYYRSISGYNDELLWAAAWLYQASNNQYYLDYLGRNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGHNAALFEKYKQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSRGTLRCSSGSVAPAELLNLAKSQVDYILGDNPRATSYMVGYGSNFPQRTHHRGSSIVSIKVNPSFVSCRGGYATWFSSKKSDPNLLTGALVGGPDAYDNFADERDNYEQTEPATYNNAPLIGILARLSGGHGRYNQLLPVAVPAPKPVVTKPQPSSPVSPKLTPTPVSGAGPISIQQKMTTSWFAGGKTYYRYSTVVTNKSSKDLKSLNLSISKLYGPIWGLTKSGDSYTFPSWLPSLSAGKSLEFVYIHAASQADVSVANYSLA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03529 628 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 463 481 IPR033126 -
Arst3g03529 628 SUPERFAMILY Carbohydrate-binding domain 532 618 IPR008965 GO:0030246
Arst3g03529 628 Gene3D - 25 493 IPR012341 GO:0005975
Arst3g03529 628 Pfam Glycosyl hydrolase family 9 28 487 IPR001701 GO:0004553|GO:0005975
Arst3g03529 628 SUPERFAMILY Six-hairpin glycosidases 23 500 IPR008928 GO:0005975
Arst3g03529 628 Pfam Carbohydrate binding domain CBM49 536 613 IPR019028 GO:0030246
Arst3g03529 628 PANTHER ENDO-1,4-BETA-GLUCANASE 12 491 - -
Arst3g03529 628 FunFam Endoglucanase 24 495 - -
Arst3g03529 628 SMART CBM49_2 536 616 IPR019028 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03529 Arst-Chr3 93538732 93543392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03529 18 628 Glycoside Hydrolase AT1G64390 78.887 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03529 K01179 - gmx:100801949 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03529 3 93538732 93543392 Arst3g03529 3 93538732 93543392 ECH