Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03501 ATGGCCGCCAAAACCATCCTCGTCACCGGTGGAGCGGGCTACATCGGCAGCCACACCGTTCTCCAGCTCCTCAATGGCGGTTTCAAGGCCGTCATCGTCGACAACTACGACAATTCTTCCGAAATCGCCGTCGAGAGGGTCAAGGGACTAGCTGGACAATTCGCCTCCAACCTCTCATGCCATAAGTTAGACCTCCGGGACAGAGAAGGACTTGAGAAAATTTTTGCTTCCACAAAGTTTGATGCTGTGATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGGAGAAACCACTGTACTACTTTAATAACAACTTGATTGGGACAATTGTGCTACTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACTGTATATGGTTGGCCAAAGCAGGTCCCATGTACAGAAGAGTTCCCTTTGTCAGCAGCGAATCCATATGGACGAACCAAGCTTATGATCGAAGAAATTTGCCGTGATCTCTACCAATCAGATCATGGATGGAAAATAATATTGTTGAGATACTTCAACCCAGTGGGTGCACATCCTAGTGGAAATATTGGTGAGGATCCTCGTGGAATTCCAAACAATCTCATGCCATTTGTTCAGCAAGTAGCTGTCGGCAGACGCCCTGCACTGACAATTTTTGGAACTGACTATAAAACAAGCGATGGCACTGGAGTTCGCGATTACATTCATGTTGTTGATTTAGCAGATGGCCACATAGCTGCATTGAATAAACTAGAGGATCCTAAAATAGGTTGTGAAGTTTATAACTTGGGAACTGGAAAGGGGACGTCAGTTTTGGAGATGGTCAAAGCTTTTGAAAATGCCTCTGGAAAGAAAATTCCACTTAAAATGGCTGATCGGAGACCTGGTGATGCTGAAATCGTTTATGCATCAACAGATAAAGCATCAAAAGAACTCAATTGGAAGGCAAAATATGGCATTCACGAGATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAATCCTTATGGATACGGATCTGCAGACTCTAAGAATTGA 1050 0.4476 MAAKTILVTGGAGYIGSHTVLQLLNGGFKAVIVDNYDNSSEIAVERVKGLAGQFASNLSCHKLDLRDREGLEKIFASTKFDAVIHFAGLKAVGESVEKPLYYFNNNLIGTIVLLEVMAAHGCKKLVFSSSATVYGWPKQVPCTEEFPLSAANPYGRTKLMIEEICRDLYQSDHGWKIILLRYFNPVGAHPSGNIGEDPRGIPNNLMPFVQQVAVGRRPALTIFGTDYKTSDGTGVRDYIHVVDLADGHIAALNKLEDPKIGCEVYNLGTGKGTSVLEMVKAFENASGKKIPLKMADRRPGDAEIVYASTDKASKELNWKAKYGIHEMCRDQWNWASKNPYGYGSADSKN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03501 349 FunFam UDP-glucose 4-epimerase 4 278 346 - -
Arst3g03501 349 Gene3D - 6 275 - -
Arst3g03501 349 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Arst3g03501 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 345 - -
Arst3g03501 349 NCBIfam UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Arst3g03501 349 Gene3D - 194 335 - -
Arst3g03501 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Arst3g03501 349 FunFam UDP-glucose 4-epimerase 6 199 - -
Arst3g03501 349 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03501 Arst-Chr3 91424411 91428109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03501 5 334 Miscellaneous Gene Families AT4G00110 27.168 1.15e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03501 K01784 - zju:107429837 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01428 5 15859603 15863614 Arst3g03501 3 91424411 91428109 PCT