Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03490 ATGTCAATTACCGAGTATGCTTTGAGTTCAATTCCCAAGGAACCGGTCAATTGGGAAAGCCAACTGGGACATGTCCCTGTGGATCCAATTCTTATATATCTCACGGTGGATGGTGTTGTCACCCCAATCCGGGTCTTGGAGTCTGATTCCATCGCTTCCGTCAAGATGAGGATTCAGACCTGCAAAGGCTTTGTGGTCAAGAACCAGAAGCTTGTCTACAGTGGCAGAGAGCTTGCGCGCAACGATACACTTATCAAGGATTATGGTGTTACTGATGGTAATGTTCTTCATTTGGTTCTTCGTCTCTCCGATCTTCTCTTCATCGTTGTCAAAACCATTAGTGGCAAAGAATTTCGATTCCATATTGATGGGCATAGAAATGTTGGATACCTTAAGCAACGAATAAAAAACAAAGGAGAAGAAGGTTTGGTCGATTTTGATGATCAAGATATTTTTTGCAATAATGAGAAGCTTGATGATCAGAGACTCTTTCATGAGTTATGCAAAAATGATGGCAATGTTATTCATTTGATAATAAAAAAATCAGCTAAGATTAGGACTACACCAGTTTGCAAAGATTTAAAACTTTTGGTTGAGGCAGGTGAATTCAAACAAGCGGAAGAGCAGTCAATTGAGGTGCCAAAGATACCAGCTGGTGTTAGTTTTTGGCTAGAACCAGTTATTGTGAATCCAAAGATGGATCTTTTTCCTTACCTATGGGATTTGATCAACACGACATACGAAGGTTTGAAGAGAGGAAATAGCCCTATTAGGTCCTTGGAGGGAACAGGAGGTACTTACTTGATGCAAGATTCAACAGGACACCAATATGTTTCAGTATTCAAGCCCATGGATGAGGAGCCAATGGCTGTCAACAACCCAAGAGGGCTACCTTGTTCATCCAATAATGAAGGCCTCAAAAGAGGGACAAAGGTAGGGGAAGGAGCTTTGAGGGAAGTTGCAGCTTACATATTGGATCATCCAAGGAATGGGTCGCGCCTTATGACAGGCGAAGCCATAGGCTTTGCCGGTGTTCCCCCTACCGTTATTGTCCAATGCTTGCATAAAGAATTTCACCATCCAAATGGGTTTGCTTGCTCATTGAAGCATGTCAAGATTGGATCCTTACAGAAGTTCATGACTAATGATGGCAATTGTGAGGACATTGGACCAAGGGCCTTTCCTGTGGAGGAGGTGCATAAAATTACTGTGCTCGACATAAGGTTGGCCAATACAGATAGACATGCTGGAAATATATTGATCAGAAAAGAAGCTGATGGTCAAATTAAGCTCATTCCTATTGATCATGGCTACTGTCTACCAGCCAAATTTGAAGATTGCACCTTTGATTGGCTTTATTGGCCGCAAGCACGTCAGCCTTACTCTCCTGATGCAATTGAATATATAAACTCTTTGGATGCAGAAAAAGATATAGAGCTTTTGAAATATTATGGATGGGATATGCCGATTGAATATGCCAGAACACTTCGAATTTCCACAATGTTGCTTAAGAAAGGTGTTCAAAGAGGTCTTACTCCCTTCGATATTGGAAGCATTATGTGCCGAGAAAATCTGAACAAGGAATCTGTAATTGAGGAGACCATTCGCCAAGCTCAGGATTCCTTGCTTCCTGGCATGGATGAATCCGCATTTCTTAAAACTATCTCTGAGATCATGGATTCCCGCCTTGAAAAGCTTGCAAACCACTAG 1710 0.4187 MSITEYALSSIPKEPVNWESQLGHVPVDPILIYLTVDGVVTPIRVLESDSIASVKMRIQTCKGFVVKNQKLVYSGRELARNDTLIKDYGVTDGNVLHLVLRLSDLLFIVVKTISGKEFRFHIDGHRNVGYLKQRIKNKGEEGLVDFDDQDIFCNNEKLDDQRLFHELCKNDGNVIHLIIKKSAKIRTTPVCKDLKLLVEAGEFKQAEEQSIEVPKIPAGVSFWLEPVIVNPKMDLFPYLWDLINTTYEGLKRGNSPIRSLEGTGGTYLMQDSTGHQYVSVFKPMDEEPMAVNNPRGLPCSSNNEGLKRGTKVGEGALREVAAYILDHPRNGSRLMTGEAIGFAGVPPTVIVQCLHKEFHHPNGFACSLKHVKIGSLQKFMTNDGNCEDIGPRAFPVEEVHKITVLDIRLANTDRHAGNILIRKEADGQIKLIPIDHGYCLPAKFEDCTFDWLYWPQARQPYSPDAIEYINSLDAEKDIELLKYYGWDMPIEYARTLRISTMLLKKGVQRGLTPFDIGSIMCRENLNKESVIEETIRQAQDSLLPGMDESAFLKTISEIMDSRLEKLANH 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03490 569 Gene3D - 107 193 - -
Arst3g03490 569 ProSiteProfiles Ubiquitin domain profile. 106 184 IPR000626 GO:0005515
Arst3g03490 569 SMART ubq_7 106 180 IPR000626 GO:0005515
Arst3g03490 569 SMART ubq_7 30 101 IPR000626 GO:0005515
Arst3g03490 569 Pfam Phosphatidylinositol 3- and 4-kinase 262 515 IPR000403 -
Arst3g03490 569 SUPERFAMILY Ubiquitin-like 35 103 IPR029071 -
Arst3g03490 569 Gene3D - 31 105 - -
Arst3g03490 569 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 40 541 IPR044571 -
Arst3g03490 569 SUPERFAMILY Ubiquitin-like 101 181 IPR029071 -
Arst3g03490 569 SUPERFAMILY Protein kinase-like (PK-like) 409 565 IPR011009 -
Arst3g03490 569 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Arst3g03490 569 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 253 550 IPR000403 -
Arst3g03490 569 CDD Ubl_ubiquitin_like 108 178 - -
Arst3g03490 569 FunFam Phosphatidylinositol 4-kinase gamma 4 27 106 - -
Arst3g03490 569 Pfam Ubiquitin family 36 102 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03490 Arst-Chr3 90298380 90300589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03490 1 567 Acyl Lipid Metabolism Gene Families AT5G24240 56.870 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03490 - - gmx:100809172 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01433 5 15886245 15889266 Arst3g03490 3 90298380 90300589 PCT