Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03487 ATGGGGTGTTCTTTCAGCAAACAACGGCAGAGGCTTATTGGGCATCATAAACAGGAAGAAGACCCAGCAGCAGTTCTTGCTGTCCAAACCTGCTTTGATATTTGTGATATTGAAGCACTGTATGAGCTGTTCAAGAAATTAAGTAGCTCCATAGTTGATGACGGCCTCATCAGCAAAGAGGAATTTCAACTTGGCTTATTTGGTAACAGCAAGAAACGAAACCTTTTTGCCGATAGGATATTTGATTTATTTGATTCGGGAAAGGATGGGGTGATAGAGTTTGGAGAGTTTGTTAGAGGACTCAGCGTGTTCCATCCTGCAGCGCCCCAACCACAAAAAGCAGCTTTTGCATTTCGGCTCCACGATATACGGCAAAGTGGCTTTATTGAACGCGACGAGGTAGGGAATAATAAGGTGCTGTTTTGTGAAAATATCTTCATTGAGAAGATGATATTGCGAACGGTAAGAGAGATGATTGTGGCACTACTAAGCGAGTCCCAATTGGTGTTTTCTGATGACATAATTCAGCTCATAATCGATAAGGCTTTTCAAGAAGCAGATCTCAAAGGAGATGGTAAAATTGATCCAGACGAGTGGCAACAATTTGTGGCTCGAAATCCATCTTTATTGAGGAATATGACAATTCCACATTTGAAGGACCTTAATAAGGAGTTTCGTAATTTTGAATTAAGTCCAGACTTTATTGAAGATGATATAAGAAACCTCTGA 729 0.406 MGCSFSKQRQRLIGHHKQEEDPAAVLAVQTCFDICDIEALYELFKKLSSSIVDDGLISKEEFQLGLFGNSKKRNLFADRIFDLFDSGKDGVIEFGEFVRGLSVFHPAAPQPQKAAFAFRLHDIRQSGFIERDEVGNNKVLFCENIFIEKMILRTVREMIVALLSESQLVFSDDIIQLIIDKAFQEADLKGDGKIDPDEWQQFVARNPSLLRNMTIPHLKDLNKEFRNFELSPDFIEDDIRNL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03487 242 SUPERFAMILY EF-hand 26 219 IPR011992 -
Arst3g03487 242 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
Arst3g03487 242 FunFam calcineurin B-like protein 3 22 236 - -
Arst3g03487 242 SMART efh_1 178 206 IPR002048 GO:0005509
Arst3g03487 242 SMART efh_1 76 104 IPR002048 GO:0005509
Arst3g03487 242 Pfam EF hand 179 203 IPR002048 GO:0005509
Arst3g03487 242 Gene3D - 23 237 - -
Arst3g03487 242 ProSiteProfiles EF-hand calcium-binding domain profile. 174 209 IPR002048 GO:0005509
Arst3g03487 242 PANTHER CALCINEURIN B 16 231 IPR045198 GO:0005509|GO:0019722|GO:0019900
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03487 Arst-Chr3 90049767 90051726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03487 30 242 EF-hand Containing Proteins AT5G24270 55.869 6.62e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03487 K06268 - vra:106766823 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03487 3 90049767 90051726 Arst3g03487 3 90049767 90051726 ECH