Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03145 ATGAATACTTCTTCTCTCTCCTTCCTTCACAGGACCGCCCGCCACACCCGCATCAGGAAGAAGGTTGAAGGGACACCAGAAAGGCCACGATTGTCCGTGTTCCGATCCAACAAGCATCTTTCTGTCCAGGTCATAGATGACACCAACATGCACACTCTTGCTTCGGTTTCAACAATGCAGAAGGCAGTTTTTGAAGAGTTCAACTACACAGCTGGTCCTACAGTTGAAGTAGCAAAGAGGGTTGGTGAAATCATTGCAAAGTCCTGTCTGGAGAAAGGGATTACAAAGGTGGCCTTCGACCGAGGTGGATACCCGTACCATGGTCGTGTTCAAGCACTCGCAGATGCAGCTCGCGAACATGGCCTAGAGTTCTAA 375 0.496 MNTSSLSFLHSAFPTSSSFPPSFSFVVEAHSTTRRQDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTNMHTLASVSTMQKAVFEEFNYTAGPTVEVAKRVGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALADAAREHGLEF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03145 151 FunFam 50S ribosomal protein L18 32 151 - -
Arst3g03145 151 Hamap 50S ribosomal protein L18 [rplR]. 33 151 IPR004389 GO:0003735|GO:0005840|GO:0006412
Arst3g03145 151 SUPERFAMILY Translational machinery components 34 149 - -
Arst3g03145 151 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 31 151 IPR005484 GO:0003735|GO:0005840|GO:0006412
Arst3g03145 151 CDD Ribosomal_L18_L5e 45 149 - -
Arst3g03145 151 Gene3D - 32 151 - -
Arst3g03145 151 NCBIfam 50S ribosomal protein L18 34 151 IPR004389 GO:0003735|GO:0005840|GO:0006412
Arst3g03145 151 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 33 151 IPR005484 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03145 Arst-Chr3 56233601 56236057 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03145 K02881 - gmx:100306308 238.039