Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03024 ATGGCGTGCTCATCGTCAACGCCGGCGGCGTGGTGGTTCACCATCGCGGTATTGTTCTTTGTCGTCGCCGCCGCATCGGCCGGGTGGATCTCCGATGATCCGAACCCAATCCGAATGGTGCCAGACGAGCTCCGAGAAGTGGAGGCGGAGGTGGTTAGGGTCGTCGGGCGAACCCGGCACGCTCTCTCTTTCGCTCGGTTCGCCGTCAGACATGGAAAACGATATGAGAGTCCCGAAGAGCTGAAGATGCGATTTGAAGTGTTCTCTGAGAACAAGAGGCTCATAAGATCTACTAACAGAAAGCGATTGTCGTACACTCTCGCCGTTAACCATTTTGCCGATTGGACTTGGGAGGAGTTCAAAAGGCACAGACTAGGCGCAGCACAAAATTGCTCTGCTACCCTTAAGGGCAATCATAAGCTTACTGAAGCTGTTCTTCCTGAGACGCAAGACTGGAGAAAAGAAGGTATTGTTAGCCCAGTCAAAGATCAAGGCTCCTGCGGATCTTGCTGGACATTCAGCACAACTGGAGCTTTAGAAGCAGCCTATGCACAAGCGTTTGGAAAGAGCATCTCTCTTTCTGAGCAGCAGCTAGTGGATTGTGCTGGTGCTTTCAATAACTATGGTTGTAATGGTGGGTTGCCATCCCAAGCTTTTGAATACATCAAATACAGTGGTGGACTTGACTCAGAGGAAGCATATCCCTATACCGCGAAGAATGGTGTCTGCAAATTCAATGCTGAAAATGTTGCTGTTCAAGTCCTTGACTCTGTCAATATTACCTTGGGTTCTGAGGATGAATTAAAGCATGCAGTTGCTTTTGTTCGGCCAGTTAGTGTGGCATTTCAGGTGGTTGATGGTTTCCGATTCTATAAGGATGGTGTTTACACTAGTAACACTTGCGGTAGCACATCCCAGGATGTAAACCATGCTGTTCTCGCTGTTGGGTATGGTGTTGAAAATGGTGTCCCATATTGGCTTATTAAAAATTCATGGGGAAAATCATGGGGTGACGATGGTTACTTCAAGATGGAGCTGGGGAAGAATATGTGCGGTGTTGCTACTTGTGCCTCGTATCCAATTGTGGCTTAG 1092 0.4844 MACSSSTPAAWWFTIAVLFFVVAAASAGWISDDPNPIRMVPDELREVEAEVVRVVGRTRHALSFARFAVRHGKRYESPEELKMRFEVFSENKRLIRSTNRKRLSYTLAVNHFADWTWEEFKRHRLGAAQNCSATLKGNHKLTEAVLPETQDWRKEGIVSPVKDQGSCGSCWTFSTTGALEAAYAQAFGKSISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKYSGGLDSEEAYPYTAKNGVCKFNAENVAVQVLDSVNITLGSEDELKHAVAFVRPVSVAFQVVDGFRFYKDGVYTSNTCGSTSQDVNHAVLAVGYGVENGVPYWLIKNSWGKSWGDDGYFKMELGKNMCGVATCASYPIVA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03024 363 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 63 355 IPR013128 GO:0008234
Arst3g03024 363 PRINTS Papain cysteine protease (C1) family signature 164 179 IPR000668 GO:0006508|GO:0008234
Arst3g03024 363 PRINTS Papain cysteine protease (C1) family signature 310 320 IPR000668 GO:0006508|GO:0008234
Arst3g03024 363 PRINTS Papain cysteine protease (C1) family signature 325 331 IPR000668 GO:0006508|GO:0008234
Arst3g03024 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 164 175 IPR000169 -
Arst3g03024 363 Pfam Papain family cysteine protease 146 361 IPR000668 GO:0006508|GO:0008234
Arst3g03024 363 Pfam Cathepsin propeptide inhibitor domain (I29) 64 120 IPR013201 -
Arst3g03024 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 325 344 IPR025661 -
Arst3g03024 363 Gene3D Cysteine proteinases 55 362 - -
Arst3g03024 363 SMART pept_c1 146 361 IPR000668 GO:0006508|GO:0008234
Arst3g03024 363 SUPERFAMILY Cysteine proteinases 59 361 IPR038765 -
Arst3g03024 363 SMART Inhibitor_I29_2 64 120 IPR013201 -
Arst3g03024 363 FunFam Cysteine proteinase 2, putative 57 362 - -
Arst3g03024 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 308 318 IPR025660 -
Arst3g03024 363 CDD Peptidase_C1A 147 360 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03024 Arst-Chr3 47680548 47685682 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03024 K01366 - qsa:O6P43_002662 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03024 3 47680548 47685682 Arst3g03024 3 47680548 47685682 ECH
Arst1g02651 1 88351719 88354325 Arst3g03024 3 47680548 47685682 PCT