Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03008 ATGGTAACAATTGCTGCAGCCAACGCCACCAAGAGAATAGAGACTTACGAGGAGTTCGCAAAAGTACACGCCATACTCCTCGCTGCTTCGGGCTTGCCCGAGTCCCTCCACCGCCGCCTCTTCCAGAAGCTCTCCGCCGAGTGCTTCGACGGCGGTAACTACTTCCAGATCGAGCCATGCGAGGAAGGCCGCCAGAGGCTCCTCGTCCTCACCGCGGAATCCATGGCAAAGCACTCCGACGTCTTCCTCGTCGACCATGCTTGGACCTTCAGACTCACCGATGCTTACAAGCAGCTGCATGAGGTTCCGGGATTGGCGGAGAGGATGGGGGCGTTGATGTGTGTGGATATTAATTTGAATGCAGAGGGAGAAGATGATGGAGCTTTGAGTGATACACGTGGCAGTGTTACAGAGGTTCTGGAGAGTGAGGTTCGAGAAGCAAAAGAGAAAAGTGATGGTAAGTTGAGGTGGTTGGAGCTTGAGGGGCTTGATATAAATGATGAGATGCTCTTGTCTCTCGAATTACCAACTGGATTTCCGGATTTAGTGGCCCTTAGCCTGCTTGGAAACAAGCTCAATAGAGTGGAAACAATTGTTCAGGAAGTTAGCAAATTTAAACAACTTAAAGGACTCTGGCTGAACAATAACCCGGTTCTAGAAAAAGGTGATAGTGAACTTGTGGATGCACTTCTTAAGGAGTTGCCAGAACTGGAAATTTATAATTCAACTTTCACAAGCAATTTTGGGGAATGGGCCTTGGGGTTCTGTGCAGGGATATATGAAAAGGATAACCCAGGAAATGTTGATCAGGCTAGTACTCCGTTGCAGAGTGTGTCAACTCTTGATCTTTCAAATAGAAATATTCACAGTTTAATCAACAAGGCATTTACACCCAATTGTTTGCCATCTCTTTCATGCCTGAATATTCGTGGAAATCCATTGGAGCAAAACTCAATTGGTGGCTTATTAGATCTATTAAGGACATTCCCTTCATTGTGTTCTTTGGAGGTGGATATTCCTGGTCCACTTGGAGGAAGTGCCGTTGAAATCCTGGAATCACTTCCTAACATTTCCCAGCTAAATGGCATCAGTGCATCAAAAATATGGGAAACTGGAAAGCATGTTATAGATTCAGTGCTTCTTCCTCGTCTTCCGGAGTGGACTGCTGATGACCCTCTTGCTGATCGTATTGTAAATGCAATGTGGCAATATCTAATGACATATAGACTTGCTAATGAAGAAAAATTAGATGAGACTTCTGTTTGGTATGTGATGGATGAACTGGGTTCGGCTTTGCGGCATAGTGATGAACCAAATTTCAGAGTGGCACCTTTTCTTTTCATGCCTGATGGTACTTTGGCATCAGCTGTGAGCTTTTCTATTCTGTGGCCAACACAGAACGTTATAAAAGGTGATGAATGCACTCGTGATTTTCTACTTGGTATTGGGGAGGATAGACAACGTTCTGCCAGACTTACTGCCTGGTTCCACACACCAGAGAACTATTTTGTCCAAGAGTATGAGAAGCACAATCAGAAATTGCAATCCAGAAGCTTAACATTACCCAAGGTGCAGTCTTCTGAGACTAGAAGCATTCGTCATCATGATGGTCGTGCTTTACGTGTCTACACAGATATACCGCACGTGGAGGAAAACTTGACACATCCTGATTTTGTAATCACAAAGGAACCAAAAGATGCAGATATAATATGGACAAGTGAGCAGGTAGATGAAGAGATGAAGAAAGCTACAGGAATAACAGATCATCAATACATCAACCAATTTCCATTTGAGGCATGTCTTGTAATGAAACATCATTTGGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGCTGCAGCCTACTTATAACCTTGAAACACATCTGTCTCAACTTATTGGTGACTATCACGTACGCAAAAGAAAAGGACTAGACAACCTTTGGATCTTAAAACCTTGGAACATGGCCCGAACTATTGATACAACTGTAACTGATAACTTACCTTCGATTATCCGGCTCATGGAAACAGGTCCAAAGATTTGCCAGAAGTATATTGAAGAACCTGCTTTGTTCCAGGGGAAAAAGTTTGATCTCCGTTACATCGTATTGGTCCGGAGCATGAATCCTTTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCCAATAATAAATATTCTCTGGACAGAAGTAGTTTTTTTGAGTATGAAACTCACTTCACCGTTATGAATTATCGTGGAAGAATAAATTTCAAGAATACTAAAGATTTTGTGAGGGAATTTGAGGAAGAGCATCAAGTTAAATGGTCAGATATACATACTCGAGTAAGAAACATGATTCTATCTGTATTCGAGTCGGCTGCTGTTGTACATCCAGAGATGCATAGTACAAAATCAAGGGCCATTTATGGTGTAGATGTCATGTTGGACAGATATTTCCAACCAAAGATACTTGAGGTGACATACTGTCCGGACTGTACTCGAGCATGCAAATACGACATGGAGATTGTGGTAGGAGACGGAGGTGTTGCCAAGGGGTGTGATTTTTTCAACAATGTGTTTAGGTGTCTCTTTTTGAATGAGATTTCACAGGTTAGCCCGTTGTATTACAAGCATAATTAG 2631 0.4295 MVTIAAANATKRIETYEEFAKVHAILLAASGLPESLHRRLFQKLSAECFDGGNYFQIEPCEEGRQRLLVLTAESMAKHSDVFLVDHAWTFRLTDAYKQLHEVPGLAERMGALMCVDINLNAEGEDDGALSDTRGSVTEVLESEVREAKEKSDGKLRWLELEGLDINDEMLLSLELPTGFPDLVALSLLGNKLNRVETIVQEVSKFKQLKGLWLNNNPVLEKGDSELVDALLKELPELEIYNSTFTSNFGEWALGFCAGIYEKDNPGNVDQASTPLQSVSTLDLSNRNIHSLINKAFTPNCLPSLSCLNIRGNPLEQNSIGGLLDLLRTFPSLCSLEVDIPGPLGGSAVEILESLPNISQLNGISASKIWETGKHVIDSVLLPRLPEWTADDPLADRIVNAMWQYLMTYRLANEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPDGTLASAVSFSILWPTQNVIKGDECTRDFLLGIGEDRQRSARLTAWFHTPENYFVQEYEKHNQKLQSRSLTLPKVQSSETRSIRHHDGRALRVYTDIPHVEENLTHPDFVITKEPKDADIIWTSEQVDEEMKKATGITDHQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYHVRKRKGLDNLWILKPWNMARTIDTTVTDNLPSIIRLMETGPKICQKYIEEPALFQGKKFDLRYIVLVRSMNPLEIFLSDCFWVRIANNKYSLDRSSFFEYETHFTVMNYRGRINFKNTKDFVREFEEEHQVKWSDIHTRVRNMILSVFESAAVVHPEMHSTKSRAIYGVDVMLDRYFQPKILEVTYCPDCTRACKYDMEIVVGDGGVAKGCDFFNNVFRCLFLNEISQVSPLYYKHN 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03008 876 Gene3D Ribonuclease Inhibitor 258 367 IPR032675 -
Arst3g03008 876 ProSiteProfiles TTL domain profile. 535 863 IPR004344 GO:0036211
Arst3g03008 876 Gene3D - 664 843 - -
Arst3g03008 876 Pfam Tubulin-tyrosine ligase family 589 839 IPR004344 GO:0036211
Arst3g03008 876 SUPERFAMILY RNI-like 154 362 - -
Arst3g03008 876 Gene3D Ribonuclease Inhibitor 124 247 IPR032675 -
Arst3g03008 876 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 9 871 IPR027749 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03008 K16609 - gmx:100809212 1453.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03008 3 46879659 46886862 Arst3g03008 3 46879659 46886862 ECH