Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02999 ATGAAGATGGTTCTCGCCGCTATCTTCTTAGTATTTTCTCTCTTCACCTTCTCCCAGGCTTCCGTAGTAGATTTCTGTGTTGCTGACTATACAGCTCCCAACGGCCCTGCAGGGTATTCTTGTAAAAGTCCTGCAAAGGTCACCGTAGACGATTTCGTATACAGTGGCCTTGGAGCCGTTGGAAACACCTCAAACATCATAAAAGCCGCCGTGACGCCTGCATTTGATGCCCAGTTTGCAGGCGTCAACGGCCTTGGAATCTCCACGGCCCGTTTAGACTTGGCACCGGGTGGAGTGATACCACTCCACACGCACCCCGGTGCCTCGGAGCTCCTTGTTGTGGTGCAAGGAACGATCTGTGCAGGGTTCATTTCTTCCGATAACACGGTGTATTTCAAGACCCTCAAGAAGGGAGATGTTATGGTGTACCCTCAAGGGCTTTTACACTTCCAACTCAATGGTGGTGGGACTCAGGCTTTGGCGTTTGTGAGCTTCAGCAGTGCCAATCCTGGACTTCAAATCTTGGACTTTGCGTTGTTCAAGAGTGATTTCCCAACTGAGTTGATAACGCAGACAACTTTTCTTGATGCTGCTCAGGTGAAGAAGCTCAAGGGTGTGCTTGGAGGCTCAGGTTAA 636 0.5016 MKMVLAAIFLVFSLFTFSQASVVDFCVADYTAPNGPAGYSCKSPAKVTVDDFVYSGLGAVGNTSNIIKAAVTPAFDAQFAGVNGLGISTARLDLAPGGVIPLHTHPGASELLVVVQGTICAGFISSDNTVYFKTLKKGDVMVYPQGLLHFQLNGGGTQALAFVSFSSANPGLQILDFALFKSDFPTELITQTTFLDAAQVKKLKGVLGGSG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02999 211 PRINTS Germin signature 166 181 IPR001929 GO:0030145
Arst3g02999 211 PRINTS Germin signature 103 123 IPR001929 GO:0030145
Arst3g02999 211 PRINTS Germin signature 133 153 IPR001929 GO:0030145
Arst3g02999 211 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 16 204 - -
Arst3g02999 211 ProSitePatterns Germin family signature. 98 111 IPR019780 GO:0030145
Arst3g02999 211 CDD cupin_OxOx 18 207 IPR001929 GO:0030145
Arst3g02999 211 Gene3D Jelly Rolls 19 210 IPR014710 -
Arst3g02999 211 SUPERFAMILY RmlC-like cupins 22 204 IPR011051 -
Arst3g02999 211 FunFam Auxin-binding protein ABP19a 19 210 - -
Arst3g02999 211 Pfam Cupin 61 201 IPR006045 -
Arst3g02999 211 SMART Cupin_1_3 55 201 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02999 Arst-Chr3 46637564 46638586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02999 1 210 Miscellaneous Gene Families AT5G20630 68.095 8.48e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02999 - - gmx:100806553 342.428