Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02955 ATGATGTTGTCGAGAGGTGAAGCTGGTAAGAAGAGTGTTGGTGGTTCTAATAACCAAAAGAGGTTGTTGAAAGATGTTGAGACTATGAGCAAAGCTCTTTACTCGGACAGAAATTCATCAAGGAATTCAATTCCAACATGGAGTTCTCGATCCAAGCCCCTTTTGCCTGATCCGAAATCAAGGCCGAAATCCGGTACTGGAGACGAAACGAATTCGCAGAAGGATAAGAGGTCCATATGGAATTGGAGGCCGTTGAAAGCCCTTTCCCATATACGCAATAAGAGATTTAATTGTAGTTTTTATCTCCAAGTCCATTTGATTGAAGGGCTGCCTTTGAATTTCGAGGATTCAGTGCTTTCCGTGTATTGGAAAAGGCGCGATGGGGTTCTGGTGACGCGGCAGGCTGTGGTGGTTGAAGGAAGGGCTGAGTTTGAAGAGAAGTTGACTTACACTTGCTCAGTGTATGGTAGTAGGAGTGGACCTCATCATTCGGCCAAGTATGAGGCCAAGCATTTCTTGCTCTATGCTTCTCTTGTTAATGCGCCTGACCTTGATTTGGGGAAGCACCGCGTCGACCTCACGAGGCTGCTTCCTCTTACGCTGGAGGAGCTTGAGGAGGAGAAGAGCTCCGGGAAGTGGACTACAAGTTTTAGGCTAACTGGATTGGCTAAGGGTGGCGTGATGAATGTTAGTTTTGGATATCTGGTTGTTGGTGATAATGCTGGTGGTTCTAGAGACAACCATCATGCTCCTAATTCATTAAATTTCAGGCAGAGTAGTTTGGCTTCAACGAAATCAGATGTTAAACCGAGACAGTTTGATGGAAGCAGCAGCATCAGGCGTGCTGGAAGTTTACAAGGTTTTATCAGTCCGTCTTTGTCTGGGTCCATAGATGAGGTAAAGGATCTTCATGAGGTATTGCCAACGTCCAAGTCTGCACTCGCCAGCTCTATCGACATCTTGTATAAGAAATTTGAAGAAGAAAAGGTACATGATCCTCTTCACAGTGAACCTGCAGTTGATGCTTTTGCCAATAGTGTTGAGCCAGTCAAACCAGATGCCTATGCTTCATCTGATCTTGGAAATGATAATGCTGAAGATCATGTCGGTAATCATACAAATACAGGTCCAGTGCATGATGAACCTGAACTCGATGCATATCATGAAAAACTGGATACAGTTAAACAAGATGGCTATCCCCATTCCGATTCTGCAAAAGAAAACCCTGACCAGTGCCAAGGTAATGAGTTTTCTGTTGTTGACAAGGGCACAGAAATGGCACCAAATGAACCCTTTAAACTAGAAGAGTCCATGATAATGGCTCATGAGGATTCTCCTGCTGTTGATAGTAATTGTAACTTTGGTACTGAAAATCTGCAAGTATCTTCAGAAAATAGTGTGATACTTGATTCTTTTGGTGAATTAAATGATAATTCCAATGATCAAGCACAAGTAAATGAGTTTACTTCCAAAGAGGATGGTTTATACACAAAAGAACAGCTCCTGCAAGAACTAGAATCGGCTTTAAATAGCGTATCAGATTTGGAGACAGCAGCCCTAGACTCTCCTGAAATTATGGAAACCAAATATGAACCTAAGATGAAAGAAGCACATAGCATGGATGATGTTACAGAATCAGTTGCCAGTGAATTTTTAAGCATGCTAGGCATGGAACACAGACCAATGGGCTTGAATTCTGAAGGTGATCCTGAGTCTCCAAGAGAGCTCCTTTTGAGACAATTTGAGAAGGAGGCTTTGGATGGGGGCTTCTCTTTGTTTGATTTTGGCATGGGCGATGATGATGAGGCAGATGCTGGCTACGATGCTTCTACTGGATCTGAGCACTGGAACTACTCTGAGGGTATTAGGCCATCATCATCATCCTTGTTTCAAGATATGTGCAAGGAGCATCCGGCTGAGTCTAAGGATGTGAGAGGCAAACAGAAAGCTCAGATGCTAGAAGATTTGGAAACAGAAGCCTTAATGCGGGAGTGGGGTTTGAGTGAGAAGGTTTTTCTTCAATCTCCTTCAAAAGATCGTGTTGGTTTTGGAAGTCCTATTGATCTTCCACCTGAAGAGCCTCCTACATTGCCTCCTCTTGCTGAGGGGTTGGGCCCTTTTCTACAAACAAAAGATGGGGGGTTCGTGCGGTCGATGAATCCCACTCTTTTTCAGAATTCTAAAAGTGGTGGCAGCTTAATTATGCAAGTTTCCAACCCTGTCGTGGTACCTGCTGAAATGGGCTCCGGTATAATGGAGGTTCTGCAGGGTTTAGCTTCAGTGGGAATTGAAAAGCTCTCAATGCAGGCGAAGGAATTAATGCCACTTGAAGATATCACGGGGAAGACAATGGAACAAGTAGCATGGGAAGCTATGCCTGCCATAGAGGGTACAGAGAGGCAATGCAGTTTGCAACATGATTTGATAGCAGGGCAAGATAGTACTTTCATGCGAAGAGATTTGAAAGGAAGACCATCTGGGCAGAAGTTCAACCAGTCTAGTTCAAGTTCAGTGGACAACCAGACGGGCTCGGAGTTTGTTTCGTTGGAAGATCTTGCTCCTTTGGCTATGGACAAAATTGAGGCACTTTCAATGGAGGGTTTAAGAGTACAATCTGGCATGTCAAGTGAGGAGGCTCCATCAAACATCGTTTCCCAATCGATTGGGGATATTTCAGCTCTCCATGGTAAGGGGATTGATGTGAGTGGGTCCCTTGGCCTGGAAGGTGCTGCTGGTTTGCAGTTGATGGATACAAAAGGCAGCAGCAATGGTGTCGATGGAATAATGGGCCTATCTTTAACTCTTGACGAATGGATGAAGCTGGACTCTGGTGAGATCGATGATATCGATAACATTAGTGAGCATACTTCCAAGGTTCTTGCAGCCCATCATGCTAACTCTTTTGACTTCATGCGTGGGAATTCGAAGGGAGATAGGAAACGAAGTAAAGGCAGAAAATATGGTTTACTAGGAAACAATTTCACAGTAGCATTGATGGTGCAACTTCGTGATCCTATGAGAAACTATGAGCCCGTTGGAACTCCAATGCTCGCACTTATACAAGTTGAGAGAGAATTTGTCCTACCAAAGCAAAGAATTTACTGTACTGTGTCCGAGTTGAGGAACAACAACAATAATAAGGATGATGAGTGCGAGATAATAGCTAAGGTGGAGACAAAGGACGAAAGGAAAGAGGATAAAAGCTCCGAAGAAGAGCTCATTCCCCAGTTCAAAATTACTGAAGTCCATGTTGCAGGTGTGAAGAATGAGCCTCAGAAAAAGAAGCTTTGGGGAACTTCGACCCAGCAACAGTCTGGTTCGCGCTGGTTGCTTGCTAATGGAATGGGGAAGGGAAACAAGCTCCCATTGAAGTCGAAGGCTGCATCGAAATCCGGTGCTCAAGTTACCACAAAGGTGCAGCCTGGTGACACCTTGTGGAGCGTATCATCTCGAATTTACGGTACTGGCTCCAAATGGAAGGAACTGGCAAAATTTAATCCTCATATCAGAAACCCCAATGTCATTATACCAAGTGATACCATAAGACTTAGTTGA 3555 0.4422 MMLSRGEAGKKSVGGSNNQKRLLKDVETMSKALYSDRNSSRNSIPTWSSRSKPLLPDPKSRPKSGTGDETNSQKDKRSIWNWRPLKALSHIRNKRFNCSFYLQVHLIEGLPLNFEDSVLSVYWKRRDGVLVTRQAVVVEGRAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLVNAPDLDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLTGLAKGGVMNVSFGYLVVGDNAGGSRDNHHAPNSLNFRQSSLASTKSDVKPRQFDGSSSIRRAGSLQGFISPSLSGSIDEVKDLHEVLPTSKSALASSIDILYKKFEEEKVHDPLHSEPAVDAFANSVEPVKPDAYASSDLGNDNAEDHVGNHTNTGPVHDEPELDAYHEKLDTVKQDGYPHSDSAKENPDQCQGNEFSVVDKGTEMAPNEPFKLEESMIMAHEDSPAVDSNCNFGTENLQVSSENSVILDSFGELNDNSNDQAQVNEFTSKEDGLYTKEQLLQELESALNSVSDLETAALDSPEIMETKYEPKMKEAHSMDDVTESVASEFLSMLGMEHRPMGLNSEGDPESPRELLLRQFEKEALDGGFSLFDFGMGDDDEADAGYDASTGSEHWNYSEGIRPSSSSLFQDMCKEHPAESKDVRGKQKAQMLEDLETEALMREWGLSEKVFLQSPSKDRVGFGSPIDLPPEEPPTLPPLAEGLGPFLQTKDGGFVRSMNPTLFQNSKSGGSLIMQVSNPVVVPAEMGSGIMEVLQGLASVGIEKLSMQAKELMPLEDITGKTMEQVAWEAMPAIEGTERQCSLQHDLIAGQDSTFMRRDLKGRPSGQKFNQSSSSSVDNQTGSEFVSLEDLAPLAMDKIEALSMEGLRVQSGMSSEEAPSNIVSQSIGDISALHGKGIDVSGSLGLEGAAGLQLMDTKGSSNGVDGIMGLSLTLDEWMKLDSGEIDDIDNISEHTSKVLAAHHANSFDFMRGNSKGDRKRSKGRKYGLLGNNFTVALMVQLRDPMRNYEPVGTPMLALIQVEREFVLPKQRIYCTVSELRNNNNNKDDECEIIAKVETKDERKEDKSSEEELIPQFKITEVHVAGVKNEPQKKKLWGTSTQQQSGSRWLLANGMGKGNKLPLKSKAASKSGAQVTTKVQPGDTLWSVSSRIYGTGSKWKELAKFNPHIRNPNVIIPSDTIRLS 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02955 1184 MobiDBLite consensus disorder prediction 818 842 - -
Arst3g02955 1184 MobiDBLite consensus disorder prediction 395 414 - -
Arst3g02955 1184 MobiDBLite consensus disorder prediction 1 22 - -
Arst3g02955 1184 SUPERFAMILY LysM domain 1135 1183 IPR036779 -
Arst3g02955 1184 ProSiteProfiles LysM domain profile. 1135 1183 IPR018392 -
Arst3g02955 1184 MobiDBLite consensus disorder prediction 826 842 - -
Arst3g02955 1184 Coils Coil 498 518 - -
Arst3g02955 1184 MobiDBLite consensus disorder prediction 34 50 - -
Arst3g02955 1184 MobiDBLite consensus disorder prediction 34 75 - -
Arst3g02955 1184 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1177 IPR039614 -
Arst3g02955 1184 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1177 IPR039614 -
Arst3g02955 1184 Pfam LysM domain 1138 1183 IPR018392 -
Arst3g02955 1184 Gene3D LysM domain 1125 1184 IPR036779 -
Arst3g02955 1184 ProSiteProfiles C2 NT-type domain profile. 88 236 IPR019448 -
Arst3g02955 1184 SMART LysM_2 1136 1184 IPR018392 -
Arst3g02955 1184 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 93 208 IPR019448 -
Arst3g02955 1184 CDD LysM 1138 1183 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02955 Arst-Chr3 44214433 44218937 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02955 - - mtr:25486459 1560.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02955 3 44214433 44218937 Arst3g02955 3 44214433 44218937 ECH
Arst1g02686 1 88551364 88555275 Arst3g02955 3 44214433 44218937 PCT