Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02938 ATGGAGTGCGTTGGAGCGAGAAACTTCGCGGCAATGTCGGTTTGTTTAAGCTCTTCTTCGAGGTCGCGTTTGAGGAGGAAGAAGCTAGCGAGAATCCGAACCTCAATCTGCATTCGTGGAATTAGTTTGCACCGTCATCACCATCATGATGATCATCATTATCGTGAAGCTTCACGCTCGCAATGTCTCAGCGTGGAGGCCAAAGCTGGTGCCGGAAGCGAGAGCTGCGTGGCGACGAAAGAGGACTTCGCTGACGAAGAAGATTATATCAAGGCCGGTGGATCGGAACTCGTGTTCGTCCAAATGCAGCAGAACAAGTCCATGGAAATGCAATCCAAGCTTGCTGATAAGTTGCCACCCATATCTGTAGGAGATATATTGGATCTAGTGGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTTGCTGCAGAATCTGCCAAGTTAGGATTGAAAGTCGGGCTCATTGGTCCGGATCTTCCTTTTACAAATAATTATGGTGTGTGGGAAGATGAATTTAAAGATCTTGGACTCGGCGGTTGTATTGAGCATGTTTGGAAGGATACCATTGTATATCTTGATAATAAGGATCCCATTTTTATTGGGCGTTCTTATGGACGTGTCAGCCGACATTTGCTTCATGAGGAATTGTTGAGAAGGTGTGTCGAGTCAGGTGTATCATATCTTAGCTCAAGAGTTGAAAGGATTGTTGAGGGTAGCAATGGCCACAGTAATGTCATATGTGAATATGATATTGTGGTGCACTGCAGGCTTGCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTCTTGCAGTATGAAGTTGGGGGTCCAAAGGTGTCTGTCCAGACAGCCTATGGTGTGGAAGTTGAGGTGGAAAACAGTCCTTATGATCCCAACCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAAACTCTAGAAGCAAATTACCCAACATTTCTTTATGCAATGCCTATGTCTGGCACAAGAGTGTTTTTTGAGGAAACCTGTTTGGCATCGAAAGATGCCATGCCTTTTGAGTTATTAAAGAAAAAGCTTTTTTCGAGATTAAATACAATGGGGATCCGAATCACAAAGACTTATGAAGAGGAATGGTCTTATATCCCCGTTGGTGGGTCCCTACCCAACACAGAGCAGAAGAACCTTGCATTTGGTGCAGCTGCTAGTATGGTGCATCCAGCTACAGGCTACTCAGTTGTGAGATCTTTGTCGGAAGCTCCAAAATATGCTTCAGTAATTGCCTCTATTTTGAAAGAGGGTCATACAAGTAGCATTATTACTCATGAACGAAGTAAAGAGAATCTATCTATGCAAGCTTGGAATACCCTTTGGCCACAAGAAAGGAAACGACAGAGAGCATTCTTTCTTTTTGGATTAGCATTAATTCTGCAGCTTGACATTGAGGGCATCAGAACCTTCTTTCATACTTTCTTTCGCTTACCTAACTGGATGTGGCAAGGATTTCTTGGCTCCTCTCTTTCCTCTACAGACCTAGTACTATTTGCATTCTACATGTTCATAGTAGCACCAAATAACTTGAGAATGTGCCTAGTCAGACATCTGCTTTCGGATCCTACAGGGACAACAATGGTAAGGACCTACTTAACGATATAG 1647 0.439 MECVGARNFAAMSVCLSSSSRSRLRRKKLARIRTSICIRGISLHRHHHHDDHHYREASRSQCLSVEAKAGAGSESCVATKEDFADEEDYIKAGGSELVFVQMQQNKSMEMQSKLADKLPPISVGDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLGGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVERIVEGSNGHSNVICEYDIVVHCRLATVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENSPYDPNLMVFMDYRDYMKQNVQTLEANYPTFLYAMPMSGTRVFFEETCLASKDAMPFELLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIASILKEGHTSSIITHERSKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFHTFFRLPNWMWQGFLGSSLSSTDLVLFAFYMFIVAPNNLRMCLVRHLLSDPTGTTMVRTYLTI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02938 548 Pfam Lycopene cyclase protein 128 525 - -
Arst3g02938 548 PANTHER - 40 546 - -
Arst3g02938 548 SUPERFAMILY FAD/NAD(P)-binding domain 127 521 IPR036188 -
Arst3g02938 548 Gene3D - 127 491 IPR036188 -
Arst3g02938 548 FunFam lycopene epsilon cyclase, chloroplastic 124 467 - -
Arst3g02938 548 NCBIfam lycopene cyclase family protein 128 527 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02938 Arst-Chr3 43299174 43305188 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02938 K06444 - gmx:100790686 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02938 3 43299174 43305188 Arst3g02938 3 43299174 43305188 ECH