Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02923 ATGAAAGGAACACTAAGATACTTAGCTGGAATTGCAGGGCCAAGTGGTTTTGGTTCAAATTCAACTGCTGAACAAGTCACTCATCAACACCATTCTTCTTCTTCTTCTTCTTCCAATCTAACCGCTATTATAACTGGGGCAAGTTCTGGAATTGGAGCTGAAACAGCAAGAGTGTTAGCAAAAAGAGGAGTGAAAGTTGTGATTGCGGCAAGGGATATAAAGAAGGCTAAACAAGTCAAAGAGAAGATACAAAAAGAGATTCCAAATGCTAAGGTGGTTATTTTGGAAATTAATCTTAGCTCCTTTGCTTCTATACACTCATTTTGCTCCCACTTTATAGCTTTGGACCTTCCTCTTAATATTCTCATCAGAAATAATGCTGGAGTATTCTCTCAAAATCTTGAATTCTCTCAAGAGAAGATTGAAATGACATTTGCCACAAATTACATAGGACATTTTTTGTTGACCGAAATTCTATTAGAGAAAATGATAGAAACAGCAGAGATGAGTGGCATTGAAGGAAGAATCATAAACGTTTCTTCTGTGATTCATAGCTGGGTGAAGAATAGAGATGCCTTTCATTTCAATGACATAATCAAAGGAACAAACTATAATGGCACAAGGGCATATGCTCGGTCAAAATTGGCCAATATTCTACATGCAAAGGAAATAGCTAGGCAGCTCAAGGCAAGGAATGCAAGAGTAACTATTAATGCAGTGCATCCAGGTATAGTTAAGACAGGAATTATTAGAGGTCATCAAGGCTTATTAATGGATTCAATATTTTTCATTGCATCAAAGTTACTTAAATCGACATCACAGGGTGCATCAACTACTTGTTATGTTGCTCTGAGCCAAAAAACAGAAGGTGGAAGTGGAAAATACTTTGCAGATTGCAATGAGAGCAAGTGCTCAAGACTTGCAAATGATGAATTAGAAGCTCAAAAACTATGGAACCAAACCCAAGCCTTGTTACATAATTATTTTTGA 990 0.3687 MKGTLRYLAGIAGPSGFGSNSTAEQVTHQHHSSSSSSSNLTAIITGASSGIGAETARVLAKRGVKVVIAARDIKKAKQVKEKIQKEIPNAKVVILEINLSSFASIHSFCSHFIALDLPLNILIRNNAGVFSQNLEFSQEKIEMTFATNYIGHFLLTEILLEKMIETAEMSGIEGRIINVSSVIHSWVKNRDAFHFNDIIKGTNYNGTRAYARSKLANILHAKEIARQLKARNARVTINAVHPGIVKTGIIRGHQGLLMDSIFFIASKLLKSTSQGASTTCYVALSQKTEGGSGKYFADCNESKCSRLANDELEAQKLWNQTQALLHNYF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02923 329 PRINTS Glucose/ribitol dehydrogenase family signature 168 184 IPR002347 -
Arst3g02923 329 PRINTS Glucose/ribitol dehydrogenase family signature 41 58 IPR002347 -
Arst3g02923 329 PRINTS Glucose/ribitol dehydrogenase family signature 210 229 IPR002347 -
Arst3g02923 329 PRINTS Glucose/ribitol dehydrogenase family signature 233 250 IPR002347 -
Arst3g02923 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 303 IPR036291 -
Arst3g02923 329 PANTHER RETINOL DEHYDROGENASE 14 325 - -
Arst3g02923 329 Coils Coil 66 86 - -
Arst3g02923 329 CDD retinol-DH_like_SDR_c_like 41 318 - -
Arst3g02923 329 Gene3D - 26 329 - -
Arst3g02923 329 Pfam short chain dehydrogenase 41 183 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02923 Arst-Chr3 42802245 42880924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02923 19 252 Acyl Lipid Metabolism Gene Families AT1G63380 29.289 1.20e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02923 - - pcin:129309518 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02923 3 42802245 42880924 Arst3g02923 3 42802245 42880924 ECH